Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02302 ATGGGTAATAACAGGTTCAGATTGTCAGATATGATGCCAAATGCATGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAAAAATGGCCCTCATGTTGTGAAGAGCAAAGTTACCTCACCAACAACCTCCCAAAGGTCACAGCCAAGATACTCTCATTATTTCTCCATTGAACCAAACATAGCTGGTAAGTTATACAACTCTCCTATTTACACTAAACACTCAGACAACATATTCACTGATTCACCAAGAAGGTCATCAAAAAGAAGAACTAAGAGAAAAACCGTTTATAAGCCTTCTCCCACAGTTGTCTCTTCACCAGTTATAGAAAGTTTTAGTTGTCATTCCATAAATTGGATTAAGCCAAATCAACCTCAGTCTCCTGACTATTATCTCTCCTCCTCTGAGAGTTCTTCTGAATCAATCTTCCATGAATATGTTTCATCTGAGTCTGACTGTGACAAGTTCACTATTCCTGACCTGCTTAATGGAGTAGCCTCTGAATGCAGTTGTAGAGTTAGCTCTTCCACCAATGACATCATCATCGACATGAAAAATGAACCATTTACTGGAAATTGTGAAAATCTTGATCGGTTTGACACAATTTCACAATTAGGCCTTCCTCCAATATTGACAAAGCCAGTGAAGTTTGATGATAAGCTCATTGAAGCCATTGAGTTGAGAAGATCAACAAACTTTGATGAGGTAAAGTCTCACCAATCTCTTGCTGTTAAAGTTAGCAAAGAGGAAAGTAGTAGAACTAAGAGAGAGAGGAAAACCAGTCCAGTAGCTAGAATTTCCTCTGCTAATTCTACAGGTATAAGACTTAGAGTCAATTCTCCAAAACTCGCGAGCAAGAAAGTTCAAGCCTATGCCAGAAGGAGTGTGTCATCCAAAGCAGGCAGGGTCTCAGTGCATACAGGCTTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGAGTCAATGGTGGAGATGATAGTGGAGAACAATATCCGAGCATCAAAAGATTTGGAGAACTTGCTTGCCTGCTATCTTTCATTGAATTCAAGGGAATACCATGATTTGATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCTACTTGGAATGTAA 1146 0.3944 MGNNRFRLSDMMPNAWFYKLKDMSKSRKKNGPHVVKSKVTSPTTSQRSQPRYSHYFSIEPNIAGKLYNSPIYTKHSDNIFTDSPRRSSKRRTKRKTVYKPSPTVVSSPVIESFSCHSINWIKPNQPQSPDYYLSSSESSSESIFHEYVSSESDCDKFTIPDLLNGVASECSCRVSSSTNDIIIDMKNEPFTGNCENLDRFDTISQLGLPPILTKPVKFDDKLIEAIELRRSTNFDEVKSHQSLAVKVSKEESSRTKRERKTSPVARISSANSTGIRLRVNSPKLASKKVQAYARRSVSSKAGRVSVHTGFPEGFAVVKSSLDPQRDFRESMVEMIVENNIRASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMALLGM* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02302 381 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 112 376 IPR038933 GO:0045892
Lapu6g02302 381 Pfam Transcriptional repressor, ovate 320 376 IPR006458 -
Lapu6g02302 381 MobiDBLite consensus disorder prediction 27 52 - -
Lapu6g02302 381 MobiDBLite consensus disorder prediction 77 100 - -
Lapu6g02302 381 Pfam DNA-binding domain 1 48 IPR025830 GO:0003677
Lapu6g02302 381 NCBIfam uncharacterized plant-specific domain TIGR01568 314 376 IPR006458 -
Lapu6g02302 381 MobiDBLite consensus disorder prediction 36 52 - -
Lapu6g02302 381 ProSiteProfiles OVATE domain profile. 316 375 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02302 Lapu-Chr6 22606005 22607392 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu6g02302 Ovate 4.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02302 - - gmx:100798120 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02302 6 22606005 22607392 Lapu6g02302 6 22606005 22607392 ECH