Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02301 ATGTATTCCAATAAAGGGTGTAAAGAGGATTGCAAAGCTGAGCCTCGTTACATTGAAACCGATCCAAATGGTAGATATGCTCGGGTTGGAGATGTTCTAGGAAAAGGGGCAATGAAGACAGTGTATAAAGCAATTGATGAGGTCCTTGGAATAGAGGTTGCATGGAATCAGGTCAAACTGAATGAGGCATTGCGCAAACCAGAGGACTTGGAGCGGCTTTATTTAGAGGTTCATCTCCTCAGCACCCTCAAGCACCAATCCATCATGAGATTCTACACCTCTTGGATTGATGTCAACAATAAGACCTTCAACTTCATTACAGAAATGTTTACTTCAGGGACTCTAAGAGAATACAGGAAGAAATATAAGCACATAGGTCTACAAGCAATAAAGAGTTGGGCTCGCCAAATCTTAGAGGGTCTTGTTTATCTGCATGAACATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGATAACATATTTGTTAATGGTCATCTTGGACAACTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCCCAACCAGCTCACAGTGTTATAGGCACCCCCGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGTTGATGTCTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGATTATCCATACAGTGAATGTACTAACCCTGCACAGATATACAAAAAAGTAACATCAGGGAAGCTACCAGCAGCGTTTTTCAGGATTGACGACACAGAAGCACAAAAGTTTATTGGAAAATGTCTAGTAGCTGCAGAAAAGAGACCATCTGCAAAAGAATTGTTGCTTGATCCATTTCTTTTGTCTGATGATGCATCATCCATGGCAAAGATTGGAATTCAGAAGCCGTTTCTAAATTACAGCGAAATGGAAAAACTTAAATTGAGTGATGATTTACCTAGGACTAAAATGTCAATAACTGGGAAGCTGAATCCAGAAGATGACACTATCTTTCTCAAAGTGCAAATTTCTGAGAAGGATGGTTCTTGTAGGAATGTATATTTTCCCTTTGACATTTACACAGACACCCCTATTGATGTTGCAATGGAGATGGTGAAAGAGTTGGAAATCACAGATTTGAAACCTTCTGATATTGGAAGTATGATTGAAGGAGAGATATCTGTGCTGCTACCGAATTGGAGGAACTGTAACTATTCAGACACCTGCCATACATTCAGTTATAATGATGACAAGGACAATGAAGATCTTCACCATCATTTCCACTCTATTTCTTGTTCATCATCCCAAGAATCAATTCCAGGTTCAGCCAGCAGAGTTGATGACTTATTGAATGGATATCATTGGCTACATGGTGATGTACTTGATGATGCCAGTTCAATATGCTCTTCACATGGGATGGCCAGTTCAAACTTGTGTTCAGAGGATAGCCAGGAGGAACACAACAAGGGTTCTACAAGAAAAGATAAACACCCCATCATAAAGAGTCACATGTGTACTAGATTTTCCCCTAATGAAGACCCCATCACTTTGAACCACTGCAAAGTTCTAGCAGGACCACAAACGCCTTGTACTAGCAAAAGTAAGAGGATAATAGAGAATCGTAGACTAACTAGGAACAAGTCATTAATTGATATGAGAAGCCAGCTACTGCACAGATCACTGGTTGAGGAGATAAACAAAAGAAGATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATATGTGACACCTTATGAGGTTACCTACAAAAAGTCAAATCCAGCATGTGGTGCTTTTGATGTGAACTCTTCAAGAAGTAGTAGCAAGGGAAAATACTTAAGAGACAAAAAAATTTGA 1851 0.3976 MYSNKGCKEDCKAEPRYIETDPNGRYARVGDVLGKGAMKTVYKAIDEVLGIEVAWNQVKLNEALRKPEDLERLYLEVHLLSTLKHQSIMRFYTSWIDVNNKTFNFITEMFTSGTLREYRKKYKHIGLQAIKSWARQILEGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQLKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPAAFFRIDDTEAQKFIGKCLVAAEKRPSAKELLLDPFLLSDDASSMAKIGIQKPFLNYSEMEKLKLSDDLPRTKMSITGKLNPEDDTIFLKVQISEKDGSCRNVYFPFDIYTDTPIDVAMEMVKELEITDLKPSDIGSMIEGEISVLLPNWRNCNYSDTCHTFSYNDDKDNEDLHHHFHSISCSSSQESIPGSASRVDDLLNGYHWLHGDVLDDASSICSSHGMASSNLCSEDSQEEHNKGSTRKDKHPIIKSHMCTRFSPNEDPITLNHCKVLAGPQTPCTSKSKRIIENRRLTRNKSLIDMRSQLLHRSLVEEINKRRFKTVGAVENIGYVTPYEVTYKKSNPACGAFDVNSSRSSSKGKYLRDKKI* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02301 616 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Lapu6g02301 616 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Lapu6g02301 616 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02301 616 CDD STKc_WNK 25 285 - -
Lapu6g02301 616 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Lapu6g02301 616 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 488 - -
Lapu6g02301 616 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02301 616 MobiDBLite consensus disorder prediction 473 493 - -
Lapu6g02301 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lapu6g02301 616 SUPERFAMILY Protein kinase-like (PK-like) 29 315 IPR011009 -
Lapu6g02301 616 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02301 616 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02301 Lapu-Chr6 22594845 22600146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02301 17 588 MAP Kinase Kinase Kinase AT5G58350 58.031 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu6g02301 Pkinase 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02301 K08867 - gmx:100778102 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02301 6 22594845 22600146 Lapu6g02301 6 22594845 22600146 ECH