Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02290 ATGGACACCGACATTTCCCGGTGGGTGATGGAGTTCCTCCTCCGCAGTTCCGTCCCCGATTCCCTAATTCAGAAAACCCTAATGGCCCTTCCCCTCTCCGGCGCCGACTCCCGCCTCAAGAAGACCCTTCTCCTCCGCACTCTCCGCACCCTCCTCCTCAAGGCCTCCCTCCCGGAAACCGCGCTCCAAATCCTCGAACTCCTAGAAGACCTCGACGGTGCCACCGCCTCCACCGCACTCCGCCGTGCTTACCTCGCCGTCGCCATCGAGTGCACTGTGAAGTACCTCGCCGCCGCCCCCGACGACCCCAATGGGGAGTTCTCTGGCGCCGTAAGGCGGATCTGGCGCGGCCGCGTGGCCGCGTTAGAGGCGCGCCGGAGCGGGTTGGTGTCTGGGGAGCTGGCGCGGTGGCGGGACGACGTGGAGGCGGCGCTCGGGGATTCTAGGGCTTGCGAAAGGCTGGCGGATTTGAATAGCAGGAGGGAGGCGATGAACGAAGTGAGGGCGTATTTGAAGGAAGCGTGGGAATCGATGGGTCCTTCGTTTTTGGAATCGGTGGCGGCTATGTCGAAGGGTTTAACCAAGGAGAAAGAGGATTTTGTTGTTGGTGGTAACAGGAGTGATAATGATCATGATAATGGCAATGATAGTGATGATGCACGCATGGAGGATGTGGCAATGCATGATGAGAATCAGGGCAAGCTACAAATGGAAGAGAAAATTGATGCGAATCAGGAAGTGGGTGGGTGTGACTTGCCACTTCCGAGAGATAAAGTAATTCAGAAGCGGAATCTTCGGGTTAAACACAAACAGTCTGCACTTCGTGCATGTCATAGGGGAGTTAAAATATCTGATTCAGAGGAAGTGGAGTCTGCAAAATCATGGAGCAAACATGATTCCGTTCCTATTTCTGAAGTCAGAAAAGTTAGGGAATCCCTTAAATCAAGTTCTTATGAGTTACGAGCTTTGGTTAATGATCCTCTTCCTGATGCATTGCATATATCTGAAGTTATAAGATCCAAAAAGGCAACAAGTGATACAAATATTGAGCCACCTATTGAAAACCAGAGCGAGGATATGGATGTACCAGATCCAGATGTTTGCCAGAGTATTGTACTTTTTCAGCCTAATGATGCCAATCTTGGGAAGAAGTCTTCTGTTCATTGTAGTAATATTCATCATCCCAACTTAATGGAACGAAACATAAGTGCCCGTACCTTTGAGTGGGATGATTCAATAGACAACTTGCCACATGCAAGACAGCCTAGGAGGAGGAAAAGGAAATGGAGTACTTTGGAAGAGGAGACACTAAGGGCTGGTGTAAAAATGTTTGGAGAAGGAAACTGGGCAACAATCAGAAGTTTTTACAGTAACATATTTGACAATAGAAGTGGAGTTGATCTGAAGGACAAGTGGAGAAACATGATACGATAA 1434 0.4979 MDTDISRWVMEFLLRSSVPDSLIQKTLMALPLSGADSRLKKTLLLRTLRTLLLKASLPETALQILELLEDLDGATASTALRRAYLAVAIECTVKYLAAAPDDPNGEFSGAVRRIWRGRVAALEARRSGLVSGELARWRDDVEAALGDSRACERLADLNSRREAMNEVRAYLKEAWESMGPSFLESVAAMSKGLTKEKEDFVVGGNRSDNDHDNGNDSDDARMEDVAMHDENQGKLQMEEKIDANQEVGGCDLPLPRDKVIQKRNLRVKHKQSALRACHRGVKISDSEEVESAKSWSKHDSVPISEVRKVRESLKSSSYELRALVNDPLPDALHISEVIRSKKATSDTNIEPPIENQSEDMDVPDPDVCQSIVLFQPNDANLGKKSSVHCSNIHHPNLMERNISARTFEWDDSIDNLPHARQPRRRKRKWSTLEEETLRAGVKMFGEGNWATIRSFYSNIFDNRSGVDLKDKWRNMIR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02290 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 421 477 IPR017930 -
Lapu6g02290 477 Gene3D - 417 477 - -
Lapu6g02290 477 SUPERFAMILY Homeodomain-like 422 476 IPR009057 -
Lapu6g02290 477 CDD SANT_TRF 427 477 - -
Lapu6g02290 477 Pfam Myb-like DNA-binding domain 426 475 IPR001005 -
Lapu6g02290 477 MobiDBLite consensus disorder prediction 342 362 - -
Lapu6g02290 477 ProSiteProfiles Myb-like domain profile. 421 476 IPR001005 -
Lapu6g02290 477 MobiDBLite consensus disorder prediction 201 220 - -
Lapu6g02290 477 SMART sant 425 477 IPR001005 -
Lapu6g02290 477 PANTHER MYB TRANSCRIPTION FACTOR 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02290 Lapu-Chr6 22488619 22495801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02290 429 476 Single Myb Histone (SMH) Gene Family AT1G15720 47.917 4.03e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu6g02290 Myb_DNA-binding 5.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02290 - K11111 vun:114187915 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02290 6 22488619 22495801 Lapu6g02290 6 22488619 22495801 ECH