Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02288 ATGGCCACACAGACGCAAGATTCACCTTCAAACCCTAACCCTAATCCCAATGCCACGTCATCAACGCAGTCTTCTTCCTTGTTCTTTCGCGGCGCCGGTGCTTCCGCCGCTCCCGTTGCCGGCTCCGGCGAGTCGCACTCGCACCACCGGAGAGCACTCTCGGAGGTCAGTTACCGGCTTCCGGACGACATGATGGACCTCTCGCCATCGGATCCGTTTAACGGCGGATCCTCGACGGCGAGCCTGGAGGAGATCGGATCCGAGGACGACCTGTTCTCCACCTACATTGACGTCGAGAAGCTCGGAGGTGGCGCGAACGGCGCCGGACGCGGTGGAAATGGATCAGATCAGAGCGGTTACGGAAACGGCACCGGTACTAGTGGACACAATGACGGCGAGAAGAGTCCGAGCGCTGCAGAGGCGCGGCCGAGACACCGGCACAGTAACTCTGTCGACGGTTCCTCGTCGACGAGCATGTTCGGAGAGATCATGGAGGCGAAGAAAGCAATGCCTCCTGATAAGCTCGCAGAACTTTGGAACATTGATCCAAAGCGTGCCAAGAGAATACTAGCTAATCGACAATCTGCTGCACGTTCAAAAGAAAGAAAGGCGCGCTATATACAAGAACTAGAGCGCAAAGTTCAGACCCTTCAGACCGAGGCAACAACACTTTCTGCCCAACTCACATTGTACCAGAGGGATACAACTGGTCTGAGTAGTGAAAATACCGAGCTTAAGCTCCGCCTGCAAGCCATGGAGCAACAGGCACAACTTCGTGATGCCCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGCGAGGCATTGAACAACCACTCCGAGTCTTTCAATATTGGAATGCACCAGATGCCCTTTGCAGGGTCAAATTTCTTTTCAATCCCACAACATTCAGGTCCTCCTAGTCACCAGAACATGCAGTTGCCTCCATTTGGTCACTCCCTATCTAGCATGCCAGCTCATCAGCTACAACAAACAAATTCTCACCAAATCTCGGATATATTGCAAAACGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCATCCATTGTGAAATCTGAAGGCCCCTCAATATCTGCAAATGAGAGTAGCACTACGTTTTGA 1152 0.5217 MATQTQDSPSNPNPNPNATSSTQSSSLFFRGAGASAAPVAGSGESHSHHRRALSEVSYRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGGGANGAGRGGNGSDQSGYGNGTGTSGHNDGEKSPSAAEARPRHRHSNSVDGSSSTSMFGEIMEAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEALNNHSESFNIGMHQMPFAGSNFFSIPQHSGPPSHQNMQLPPFGHSLSSMPAHQLQQTNSHQISDILQNDQLGRLQGLDISSKGSSIVKSEGPSISANESSTTF* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02288 383 MobiDBLite consensus disorder prediction 1 86 - -
Lapu6g02288 383 CDD bZIP_plant_RF2 185 234 IPR044759 GO:0003700|GO:0006355
Lapu6g02288 383 Pfam bZIP transcription factor 184 242 IPR004827 GO:0003700|GO:0006355
Lapu6g02288 383 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 245 IPR004827 GO:0003700|GO:0006355
Lapu6g02288 383 MobiDBLite consensus disorder prediction 100 157 - -
Lapu6g02288 383 Gene3D - 183 236 - -
Lapu6g02288 383 MobiDBLite consensus disorder prediction 111 133 - -
Lapu6g02288 383 MobiDBLite consensus disorder prediction 363 383 - -
Lapu6g02288 383 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 368 - -
Lapu6g02288 383 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Lapu6g02288 383 Coils Coil 200 227 - -
Lapu6g02288 383 MobiDBLite consensus disorder prediction 135 149 - -
Lapu6g02288 383 MobiDBLite consensus disorder prediction 305 338 - -
Lapu6g02288 383 FunFam probable transcription factor PosF21 183 236 - -
Lapu6g02288 383 MobiDBLite consensus disorder prediction 1 30 - -
Lapu6g02288 383 SUPERFAMILY Leucine zipper domain 184 235 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02288 Lapu-Chr6 22468228 22471689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02288 13 383 bZIP Transcription Factor Family AT2G40620 50.374 8.70e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu6g02288 bZIP_1 4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02288 - - gmx:100775607 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02288 6 22468228 22471689 Lapu6g02288 6 22468228 22471689 ECH
Lapu6g02288 6 22468228 22471689 Lapu6g02288 6 22468228 22471689 PCT