Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02280 ATGCTTGCAACAGTGGACAATCCTTCAAACGCTTTCGAATGGACACTTGCTGAGATGATAAACCAACCTGAGTTGCTCCATCGAGCTGTTGAAGAATTGGACAATGTGGTAGGAAAAGAGAGGTTGGTCCAAGAATCAGACATACCTAAGCTCAACTATGTGAAGGCTTGCGCAAAAGAAGCTTTTCGCCTTCATCCCGTTGCACCTTTTAATCCTCCCCATGTCTCTCTGAGTGACACAATGGTGGCTGATTTCTTCATCCCAAAGGGTAGTCATGTAATTCTAAGCAGACAAGGGCTTGGAAGAAACCCTAAGGTGTGGAATGAACCCTACAAGTTCAAACCTGAACGGCACCTCAAGAGTGATGGATCTGAGGTAGTTTTGACAGAGCCAGATTTGAAGTTGATATCGTTTAGCACAGGAAGGCGTGGGTGCCCGGGAGTTATGCTTGGAACCACAATGACAGTGATGCTATTTGCTAGATTGCTGCATGGCTTCACTTGGAATGCTCCACCCAATGTTTCAGCAATCAACCTTGACGAGTTAAGTGATGATATACTTCTTGCACAACCACTTCAGGTAGTTGCTAAGCCAAGATTCGCACCAGAGCTATATCACCACTAA 624 0.4535 MLATVDNPSNAFEWTLAEMINQPELLHRAVEELDNVVGKERLVQESDIPKLNYVKACAKEAFRLHPVAPFNPPHVSLSDTMVADFFIPKGSHVILSRQGLGRNPKVWNEPYKFKPERHLKSDGSEVVLTEPDLKLISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWNAPPNVSAINLDELSDDILLAQPLQVVAKPRFAPELYHH* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02280 207 SUPERFAMILY Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02280 207 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 138 147 IPR017972 GO:0005506|GO:0016705
Lapu6g02280 207 Gene3D Cytochrome P450 1 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02280 207 Pfam Cytochrome P450 1 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02280 207 PANTHER CYTOCHROME P450 98A9 3 206 - -
Lapu6g02280 207 PRINTS E-class P450 group I signature 96 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02280 207 PRINTS E-class P450 group I signature 135 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02280 207 PRINTS E-class P450 group I signature 145 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02280 207 PRINTS E-class P450 group I signature 12 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02280 207 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02280 Lapu-Chr6 22371318 22372112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02280 1 205 Cytochrome P450 AT5G05260 62.927 7.29e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02280 - - pvu:PHAVU_006G0788000 370.548