Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02279 ATGGCTTACGCCCCCGATATTATATGGCTGCACCTTCAACCCCTTCTAATTTCTTCCTTTGTTTTGATTTGTGGTTTTACTATCATCAAAGGCTTGAGATATCAGTTAATTGAGAAGCCTAAACTACCTCCAGGTCCTAAACCATGGCCTATAGTTGGTAACCTCCCTGAAATGCTTTCAAACAGACCTGTATTTCGATGGATACACAATCTCATGCAAGAAATGAACACTGAAATTGCATGCATTCGTCTAGGAAATGTTCATGTAATCCCAGTTACATGTCCCTCCATTGCCTGTGAGTTTTTGAGAAAGCATGATGCTGAGTTTGCATCAAGACCACTAACCATGGCCTCTGATATCGTGTCTAGTGGTTATGTGACCATAGCTATTGTACCCTTTGGGGAGCAATGGAAGAAAATGAGGAGAATCTTCGTCAACGACTTGTTCTCCCCTCTCAGGCACCAGTGGTTTCAAGACAAAAGGAACCAAGAAGCTGATAACATTATGTTTTATGTCTACAACAAATGCAGCAATATGAATGATGGGGGCCTTGTGAATGTGAGAGATGTTTCACAACACTACTGTTGCAATGTGACGAGGAAACTGATTTTTAATACAAGATACTTTGGAAAGGGTAGGGTGGATGGAGGTCCTGGATCAGAAGAAGTAGAACAAGTGAATACTATTTTCACATTGCTTAAGCATGTTTATGCATTTTCAGCTTCTGATTATGTGCCGTGCTTGAGGGTAGTTGATTTGGATGGGCACAAGAAGAAGGTGAAGGAAGGGATGAGGAGGATGGAGAAGTATCATGATCCGATGGTTGAAGAGAGAATGAAGCAGTGGAAGGATGGATCAAAGAGAGTTGAAGAGGACTTGCTCGATGTTCTCATTTCACTCAGAGATGACAATCAAAATCCTACTTTGACCATCAAGGAAATCAAGGCTCTTACTATAGAACTCATGCTTGGAGGTGCAGACAATCCATCCAATGCAATTGAATATGCACTTGCAGAAATGATAAATCAGCCATATATACTTCGGAAAGCTACTGAAGAAGTAGACAAGGTTGTAGGTAAGAAAAGGATGGTGCAAGAATCAGATATTCCCAAGCTCAATTATGTGAAGGCTTGTGTGAGAGAAGCTTTTCGCCTTCATCCTGTTGTGCCTTTTAATCCTCCCCATGTCTCAACCAATGACACAATGGTGGGAAACTATTTTATTCCAAAGGGTAGCCATGTACTACTGAGCAGACATGGACTTGGACGAAACCCTAAAGTGTGGAATGAACCTCACAAGTTCAAACCTGAACGTCATGAAAAGAATGATGGATCTGTGGTTGTTTTGTCAGAGCCAGATTTGAAGTTCATATCATTTGGCACAGGAAGGAGAGGTTGTCCTGCAGTCATACTTGGGTCCACCATGACTGTGATGTTACTGGCCAGGTTGATTCATGCCTTTTCTTGGAGTGCACCTCCAAACGTATCAAGTATCAACATTATTAAGTCTGGTAATGGTGGTATGCTTGCTCAGCCACTTGTGTTAGAAGCCAAACCAAGATTAGCACCAGAGTTGTATAACATAAGTAATGAGTAA 1596 0.416 MAYAPDIIWLHLQPLLISSFVLICGFTIIKGLRYQLIEKPKLPPGPKPWPIVGNLPEMLSNRPVFRWIHNLMQEMNTEIACIRLGNVHVIPVTCPSIACEFLRKHDAEFASRPLTMASDIVSSGYVTIAIVPFGEQWKKMRRIFVNDLFSPLRHQWFQDKRNQEADNIMFYVYNKCSNMNDGGLVNVRDVSQHYCCNVTRKLIFNTRYFGKGRVDGGPGSEEVEQVNTIFTLLKHVYAFSASDYVPCLRVVDLDGHKKKVKEGMRRMEKYHDPMVEERMKQWKDGSKRVEEDLLDVLISLRDDNQNPTLTIKEIKALTIELMLGGADNPSNAIEYALAEMINQPYILRKATEEVDKVVGKKRMVQESDIPKLNYVKACVREAFRLHPVVPFNPPHVSTNDTMVGNYFIPKGSHVLLSRHGLGRNPKVWNEPHKFKPERHEKNDGSVVVLSEPDLKFISFGTGRRGCPAVILGSTMTVMLLARLIHAFSWSAPPNVSSINIIKSGNGGMLAQPLVLEAKPRLAPELYNISNE* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02279 531 Pfam Cytochrome P450 43 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 Gene3D Cytochrome P450 37 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lapu6g02279 531 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 FunFam Cytochrome P450 9 36 524 - -
Lapu6g02279 531 SUPERFAMILY Cytochrome P450 43 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 CDD CYP79 77 521 - -
Lapu6g02279 531 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 528 - -
Lapu6g02279 531 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02279 531 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02279 Lapu-Chr6 22359937 22363069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02279 42 526 Cytochrome P450 AT5G05260 56.122 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02279 - K14984 gmx:100787378 917.531