Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02268 ATGATGACTGTAAAATTTAAGCGGCAATATATGATTCCATTCAGAAAACAACTCTCCATGAAGTTCCATTCTACTTCAGTGACTTCTTTCCTCTTCGTCATAGTTATTATTTTTCCTTTGGCTTTTGCTGATCTAAGTTCAGATAAGCAAGCCCTTCTTGATTTTGCTAATGCTGTCCCTCACCGACGAAACCTTATGTGGAATCCATCCACCTCAGTCTGCACATCTTGGGTAGGCATCACTTGCAATGGAAATAGAACTCGTGTTGTTAATGTTCGGCTTCCTGGAGTTGGACTAGTTGGCACCATCCCTTCTAATACACTTGGCAAGCTTAATGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTCAGTGGAAATCTCCCTGCTGACATTGCGTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAGCATAACAACCTTTCTGGTGATATACCTGCATCATTGTCTCCCCAACTTGTTGTACTTGATTTGTCGTATAATTCCTTCACCGGTGGCATTCCAAAGACATTTCAAAATTTGTCAGAATTAACTAGTTTGAATCTCCAGAACAACTCCCTATCTGGACAGATACCTAATCTTAATGTCACTCAGCTCAGGCTTTTGAATTTAAGCTACAACCATTTGAATGGCTCTATTCCTAAAGCTCTTCAGATTTTTCCAAATTCTTCCTTTGAAGGAAACTCACTTTTATGTGGACCCCCTTTGAGGCCATGCTCAGGGGTTCCTCCTACACCTTCTCCTGCCTTGACTCCACCTCCATCAGGAAGAGGAAACTCAAAAAACAAGTTGAGTAAAATAGCTATTATTGCAATTGCTGTTGGTGGAGCTGTGGTGCTATTCTTTATTGCTCTTGTTATTGTTATTTGCTGTTTAAAGAAGGAAGATGACAGAGGCTCCAATGTAATTAAAGGGAAGGGTTCTGGTGGTGGTAGAGGTGAGAAGCCAAAAGAAGAGTTTGGGAGTGGGGTTCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGATCTTGAGGATTTGCTGAGAGCTTCAGCTGAAGTCCTGGGAAAGGGTAGCTATGGTACTGCATATAAGGCCATACTGGAGGAGTCAATGACTGTTGTGGTGAAAAGATTGAAAGAAGTTGTGGTAGGGAAGAAGGACTTTGAACAGCAGATGGAAATTATGGGAAGAGTTGGACAACACACAAATGTTGTGCCCCTTCGTGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTATATCCAGGGTGGCAACCTACACACACTCTTGCATGGTGGAAGGACAGGTGGAAGAACACCCTTAGACTGGGAGTCCCGAATAAAAATATCCCTTGGAACTGCCAAAGGACTTGCCCACATTCATTCTGTAGGTGGTCCCAAATTCACACATGGAAATATCAAGTCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTCGCCCCCCTTATGAATATTCCTGCTACCCCTTCTAGAGCTGCTGGGTATCGCGCTCCAGAAGTGATTGAAACTCGTAAACACTCACATAAATCAGATGTGTATAGTTTTGGTGTACTCCTTCTTGAGATGCTTACTGGGAAAGCTCCTCTCCAATCTCCTGGACGTGATGACATGGTTGATCTCCCCAGGTGGGTGCAGTCTGTTGTTAGGGAAGAATGGACTGCTGAAGTTTTTGATGTTGAGCTTATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATAGGCATGGCCTGTGTTGCAAAAGTACCAGATATGAGACCTAGTATGGATGACGTAGTAAGAATGATCGAAGAGATTCGGCAATCTGACTCAGAGAACCGACCATCTTCTGAAGAAAACAAATCTAAGGACTCAAATGTTCAGACTCCATAG 1956 0.4233 MMTVKFKRQYMIPFRKQLSMKFHSTSVTSFLFVIVIIFPLAFADLSSDKQALLDFANAVPHRRNLMWNPSTSVCTSWVGITCNGNRTRVVNVRLPGVGLVGTIPSNTLGKLNAVKIISLRSNLLSGNLPADIASLPSLQYLYLQHNNLSGDIPASLSPQLVVLDLSYNSFTGGIPKTFQNLSELTSLNLQNNSLSGQIPNLNVTQLRLLNLSYNHLNGSIPKALQIFPNSSFEGNSLLCGPPLRPCSGVPPTPSPALTPPPSGRGNSKNKLSKIAIIAIAVGGAVVLFFIALVIVICCLKKEDDRGSNVIKGKGSGGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKKDFEQQMEIMGRVGQHTNVVPLRAYYYSKDEKLLVYDYIQGGNLHTLLHGGRTGGRTPLDWESRIKISLGTAKGLAHIHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLAPLMNIPATPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPSMDDVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02268 651 Gene3D Ribonuclease Inhibitor 45 200 IPR032675 -
Lapu6g02268 651 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 432 639 - -
Lapu6g02268 651 FunFam pollen receptor-like kinase 1 324 431 - -
Lapu6g02268 651 MobiDBLite consensus disorder prediction 626 651 - -
Lapu6g02268 651 Gene3D Ribonuclease Inhibitor 201 247 IPR032675 -
Lapu6g02268 651 MobiDBLite consensus disorder prediction 626 642 - -
Lapu6g02268 651 ProSiteProfiles Protein kinase domain profile. 356 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02268 651 MobiDBLite consensus disorder prediction 308 331 - -
Lapu6g02268 651 CDD STKc_IRAK 362 627 - -
Lapu6g02268 651 Gene3D Phosphorylase Kinase; domain 1 324 431 - -
Lapu6g02268 651 Pfam Leucine rich repeat N-terminal domain 46 83 IPR013210 -
Lapu6g02268 651 ProSitePatterns Protein kinases ATP-binding region signature. 362 393 IPR017441 GO:0005524
Lapu6g02268 651 Gene3D Transferase(Phosphotransferase) domain 1 432 650 - -
Lapu6g02268 651 Pfam Leucine rich repeat 102 148 IPR001611 GO:0005515
Lapu6g02268 651 Pfam Leucine rich repeat 158 216 IPR001611 GO:0005515
Lapu6g02268 651 Pfam Protein kinase domain 359 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02268 651 SUPERFAMILY L domain-like 47 246 - -
Lapu6g02268 651 FunFam Leucine-rich repeat receptor-like protein kinase 47 157 - -
Lapu6g02268 651 MobiDBLite consensus disorder prediction 317 331 - -
Lapu6g02268 651 FunFam Leucine-rich repeat receptor-like protein kinase 158 246 - -
Lapu6g02268 651 SUPERFAMILY Protein kinase-like (PK-like) 360 634 IPR011009 -
Lapu6g02268 651 ProSiteProfiles Leucine-rich repeat profile. 183 205 IPR001611 GO:0005515
Lapu6g02268 651 PANTHER OS05G0588300 PROTEIN 32 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02268 Lapu-Chr6 22247422 22252058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02268 1 649 Receptor kinase-like Gene Family AT5G58300 66.717 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu6g02268 Pkinase 7.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02268 - - gmx:100796171 1144.8