Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02265 ATGTATCTTTCAAAGAGTTTCAAGCATGAAGTTGTTGTCATCCTATGGTTTTGCTGCTATTTGCTACATGCTGCTGGGCAGAATAACATCACTAGTCCTGTTGAAGTTGAAGCATTGAGAGCCATTAAGAGTATTTTGACTGATCCTAATGGAAATTTGAGCAATTGGAATCGTGGAGACCCATGTACATCAAGGTGGAAAGGAGTTTTGTGCTTCAATGAAACAAAAGAGGATGGGTATCTGCATGTTGAAGAATTGCAATTACTGAGTTTGGAACTGTCTGGAACCTTGGCACCAGATCTTGGCAAATTAACATACATGAAAAGATTGAACTTTATGTGGAACAACATAAGCGGCAGTATTCCGAAGGAAGTTGGCAATATCAAATCTTTGGAACTTTTGCTTCTGAATGGAAATAATTTAACAGGTCAACTACCAGAGGAGATTGGCTATCTTCCAAACCTGGATAGAATACAAATCGATCAGAACCATATATCAGGATCTATACCTACGTCATTTGCAAATCTGAACAAGACAAAGCATTTTCACATGAACAACAACTCACTCAGCGGGCAAATCCCACCAGAGCTTTCCAGATTACCAAAGCTTGTTCACCTTCTTCTCGACAATAACAACTTATCTGGATATCTCCCCATTGAGCTGTACAAGATGCCAAGTTTACTTATCATTCAACTTGATAACAATAACTTTGGAGGAAATAGTATTCCTGATACTTATGCCAACATGTCAAAGTTGTTGAAGATGAGCCTTAGGAATTGCAGCTTGCGAGGACCAATTCCTGATTTAAGCAGGATACCTCACCTTCTTTATCTTGACCTCAGTTTCAACCAGTTGAATGAATCGATTCCTCCCAATAAGCTTTCTGAAAATATCACAACCATTGATTTATCAAACAACCGCCTTACTGGAAATATTCCCTCCTACTTTGATGATCTTCCACGTCTTCAGAAGTTGTCACTTGCAAACAATTCATTGACTGGCAGTGTTTCTTCCTCCATTTGGCTGAATAAGACTTCGGATGGAACAGAAAACTTTCTCTTGGAGTTGCAAAATAATAGCCTTACAGCCATATCAGGAAGTACTGATCTTCCTCCAAATGTCACAGTTGTGCTTGATGGGAATCCCCTATGCTCAAACATAACCTTTGTTCAGTTCTGTGGATCTGAAGGTGCTACTGTAACAAATGGCTCATTCACTACAAACTCCAGTGTTTGTCCCCCTCAAGCATGCCCTCCTCCTAACGAGTACTCTGTTAATTGTTTCTGTGCGCTTCCATTGGTTGTTGCCTATCGGCTGAAAAGTCCTGGATTTTCAGACTTTACTCCATATTTGAATGAATTTGAGACTTACATGACTACTGGTGTTCAAATATCCACTGATCAGCTAGAATATGCTTTTTACTGGCAAGTAGGACCTCGACTGAGAATGGACTTGAAGTTTTTCCCTCGATATGTTAATAACGCTAGTAATCATACTTTCAATAGAAGTGAGCTTCTACGGCTCACAGGCATGTTCACAGGATGGCTAATTCCTGATAGTGATCTGTTTGGGCCTTATGAACTGCTTGGCTTCAATCTTTTGGGTTCTTACAAGGATGAAATTGGCAAGAGTTCAAAATCAGGAATAAGCACAGGTGCACTGGTTGGCATAATTGTAGGAGCAATTGCCTGTGCAGTGACATTATCTGCAATTGTCACCATTCTTATATTGAGAATCAAAATGAGAGGTTATCATACTGTTTCCAAGCGACGTAATGCATCTAAGATCTCTATAAAAATTGATGGTGTAAGGGCCTTTACTTATGGAGAATTGTCCTCTGCCACAAACAATTTCAGCATTTCTGCTCAAGTTGGACAGGGGGGCTATGGGAAGGTTTATAAAGGGACTCTTTCTGATGGCACAGTTGTTGCAATAAAACGTGCACAAGAGGGATCTCTGCAAGGTGAGAAGGAGTTCCTTACAGAAATATCATTACTATCAAGATTACATCATCGCAACCTTGTTTCTCTGCTTGGATACTGTGATGAAGAAGGTGAACAGATGCTCGTTTATGAATTTATGTCTAAGGGCACATTGAGGGATCACCTTTCTGTTACAGCTAAAGAACCTCTGACTTTTGCCATGAGATTGAAGATCGCACTAGGGGCAGCTAAAGGTCTCATGTATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTAAAGGCTAGCAACATATTGTTGGACTCTAAGTATTCTGCAAAAGTGGCTGATTTTGGACTTTCACGTCTTGCCCCAGTTCCAGATATGGAAGGAGTTGTGCCTGGTCATGTTTCTACGGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGATGCATCCTATCTCACACGGAAAAAATATTGTTAGAGAGGTTAATATTGCGTACCAATCAGGTGTAATATTTTCAATTATCGATGGACGCATGGGGTCTTATCCATCTGAGCATGTGGAAAAATTTCTGAAATTGGCCTTGAAGTGTTGCGAAGATGAGCCAGAGGCGCGGCCTAGAATGGCAGAAGTGGTTAGAGAGCTTGAAAACATATGGTCTACAATGCCAGAATCAGATACCAAGAGAGCTGAATTCTTGTCCAGTGATTCTGGTAAAACAGACGGCCACAATATACCATCTTCATCCTCTGCTTCTGCTATGAAGACTCCTTTTGTATCAGGAGATGTTTCAGGTAGTGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAA 2856 0.4072 MYLSKSFKHEVVVILWFCCYLLHAAGQNNITSPVEVEALRAIKSILTDPNGNLSNWNRGDPCTSRWKGVLCFNETKEDGYLHVEELQLLSLELSGTLAPDLGKLTYMKRLNFMWNNISGSIPKEVGNIKSLELLLLNGNNLTGQLPEEIGYLPNLDRIQIDQNHISGSIPTSFANLNKTKHFHMNNNSLSGQIPPELSRLPKLVHLLLDNNNLSGYLPIELYKMPSLLIIQLDNNNFGGNSIPDTYANMSKLLKMSLRNCSLRGPIPDLSRIPHLLYLDLSFNQLNESIPPNKLSENITTIDLSNNRLTGNIPSYFDDLPRLQKLSLANNSLTGSVSSSIWLNKTSDGTENFLLELQNNSLTAISGSTDLPPNVTVVLDGNPLCSNITFVQFCGSEGATVTNGSFTTNSSVCPPQACPPPNEYSVNCFCALPLVVAYRLKSPGFSDFTPYLNEFETYMTTGVQISTDQLEYAFYWQVGPRLRMDLKFFPRYVNNASNHTFNRSELLRLTGMFTGWLIPDSDLFGPYELLGFNLLGSYKDEIGKSSKSGISTGALVGIIVGAIACAVTLSAIVTILILRIKMRGYHTVSKRRNASKISIKIDGVRAFTYGELSSATNNFSISAQVGQGGYGKVYKGTLSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLLGYCDEEGEQMLVYEFMSKGTLRDHLSVTAKEPLTFAMRLKIALGAAKGLMYLHTEADPPIFHRDVKASNILLDSKYSAKVADFGLSRLAPVPDMEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNIAYQSGVIFSIIDGRMGSYPSEHVEKFLKLALKCCEDEPEARPRMAEVVRELENIWSTMPESDTKRAEFLSSDSGKTDGHNIPSSSSASAMKTPFVSGDVSGSDLVSGVIPSIKPR* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02265 951 Pfam Protein tyrosine and serine/threonine kinase 620 887 IPR001245 GO:0004672|GO:0006468
Lapu6g02265 951 Gene3D Ribonuclease Inhibitor 33 186 IPR032675 -
Lapu6g02265 951 SMART serkin_6 618 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02265 951 Gene3D Transferase(Phosphotransferase) domain 1 694 910 - -
Lapu6g02265 951 SUPERFAMILY Protein kinase-like (PK-like) 603 900 IPR011009 -
Lapu6g02265 951 MobiDBLite consensus disorder prediction 898 951 - -
Lapu6g02265 951 SUPERFAMILY L domain-like 42 392 - -
Lapu6g02265 951 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 694 903 - -
Lapu6g02265 951 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Lapu6g02265 951 MobiDBLite consensus disorder prediction 909 931 - -
Lapu6g02265 951 FunFam Leucine-rich repeat protein kinase family protein 583 693 - -
Lapu6g02265 951 Gene3D Phosphorylase Kinase; domain 1 588 693 - -
Lapu6g02265 951 ProSiteProfiles Protein kinase domain profile. 618 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02265 951 Gene3D Ribonuclease Inhibitor 187 295 IPR032675 -
Lapu6g02265 951 Gene3D Ribonuclease Inhibitor 296 417 IPR032675 -
Lapu6g02265 951 Pfam Leucine rich repeat 297 334 IPR001611 GO:0005515
Lapu6g02265 951 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Lapu6g02265 951 CDD STKc_IRAK 624 890 - -
Lapu6g02265 951 PANTHER RECEPTOR-LIKE PROTEIN 55 42 891 - -
Lapu6g02265 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Lapu6g02265 951 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Lapu6g02265 951 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02265 Lapu-Chr6 22186403 22201331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02265 18 900 Receptor kinase-like Gene Family AT5G01950 58.883 0.0 998
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lapu6g02265 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02265 - - gmx:100786467 1669.44