Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02229 ATGCTGCAACTTGAGCTACTGGTCTTACTCTTGATAAGGTGGAGTTCCAATAATACTCATGTACATGGTGCAGTTGAAAATCCACAAACAAATCTACTGAACAAGGGGTGCAGCGCGTACAACGCATCCAACTTGCGTAGCTTCTTTGCTAATATCAATGAAACGTTTGCAAGCCTGAAAGCACAAATTAGCAATGAAGAGCATAAGCACTTTGCCATAGAAGATAAAGCCAGGGGAGAGGTGCTCACATATGCTATGTTTCAATGCAGAAACTATCTCTCCACAAGTGAATGTCTTGCTTGCTTCAACACTGCCACCTCCCAAATCCGCAACTGCTCTGCTGCTAATGGCGCCAGAATCATATATGACTCCTGCTTCCTCAGGTATGAGAGTGACAGGTTCTACGATGAAACCAATGAACCTGGCGGTGGTGTATCATGTGGGAACACGAGTTCAACCGTGACTGGTTTTAGAGTGGCTGTACAACAAGTGCTAATGGAGCTCCAAGAAGCAACACCAAAAATTGAAGGTTTTTATGCAGCTACTAAGACACCGGTTGTTGGTGCTAGTGCAATTTATGCCGTTTCACAGTGTGTTGAAACTGCCATAAAGAGTAATTGTCTCAACTGCATGCAAGTTGCATACAACAACTTACAACGTTGTCTTCCCAACACAGATGGGACAGCATATGATGCTGGCTGTTTTATGAGATACTCCACCACACCTTTCTTTGCTGCGAATCAGACCATTGATATTGCACCCTTTTTAAATCAAGGAGGTTCAAGGAAGAAGTGGGGTATTATAGGTGGTAGTGTTGTTGGAGCTGTTCTTCTCCTCCTTCTGTTGTTTGGTTGGAGATGGTATAGAAAATCAAAGGATGTTCACAGAGGTGACATATTGGGAGCAACTGAGTTAAAAGGTCCAGTTAAGTACAAGTATAAAGATTTGAAAGCTGCAACAAAAAAATTCAGTGCTGAAAACAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCCGTAAAAAAACTAGTTTTGGGGAAATCAAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCACCGGAATCTGGTTAGACTTCTTGGTTGTTGCAGCAAAGGCCAAGAGAGAATCTTGGTTTACGAGTATATGGCAAATAGCAGTCTTGACAAATTCTTATTTGGTAAGAGAAAAGGTTTCCTCAGTTGGAAACAACGCTATGATATAATTTTAGGCACAGCAAGGGGACTAGCATATCTACATGAGGAGTTCCACGTGTCCATCATACACAGAGATATCAAGACTGCTAATATCTTGTTAAATGATGATCTTCAGCCAAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTCCCAGAGGATTGTTCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATGCATGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGCATTGTAGTCTTAGAAATCATAAGTGGTCAAAAGAGTACCGATGTGAAGGGTGATGAGGATGATAGTGAATATCTTCTCCAACGATCATGGAAACTGTACGAGAGAGGCTCTCACCTGGAGCTGTTGGAAGAGGCCATAGACCCTAATGAATATGATGCAGAAGAAGTGAAGAGAATAATAGAAATTGCTTTACTATGTACTCAGGCAACAGCTGCAACGAGGCCAACAATGTCTGAAGTAGTAGTATTACTCAAAAGCAAGAACTCAGTGGAGCACCCGCGACCAACTATGCCTGTGTTTGTTGGAACGAATGTGATGACTCGGGAAGGCAACTCTACTAGTTCATCTAATGCTACTGCTTCCATTTCTATTGTATCAGCTCGATGA 1920 0.4188 MLQLELLVLLLIRWSSNNTHVHGAVENPQTNLLNKGCSAYNASNLRSFFANINETFASLKAQISNEEHKHFAIEDKARGEVLTYAMFQCRNYLSTSECLACFNTATSQIRNCSAANGARIIYDSCFLRYESDRFYDETNEPGGGVSCGNTSSTVTGFRVAVQQVLMELQEATPKIEGFYAATKTPVVGASAIYAVSQCVETAIKSNCLNCMQVAYNNLQRCLPNTDGTAYDAGCFMRYSTTPFFAANQTIDIAPFLNQGGSRKKWGIIGGSVVGAVLLLLLLFGWRWYRKSKDVHRGDILGATELKGPVKYKYKDLKAATKKFSAENKLGEGGFGDVYKGTLKNGKVVAVKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGKRKGFLSWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTANILLNDDLQPKIADFGLARLLPEDCSHLSTKFAGTLGYTAPEYAMHGQLSEKADTYSYGIVVLEIISGQKSTDVKGDEDDSEYLLQRSWKLYERGSHLELLEEAIDPNEYDAEEVKRIIEIALLCTQATAATRPTMSEVVVLLKSKNSVEHPRPTMPVFVGTNVMTREGNSTSSSNATASISIVSAR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02229 639 Gene3D - 145 243 IPR038408 -
Lapu6g02229 639 Gene3D - 29 134 IPR038408 -
Lapu6g02229 639 Gene3D Phosphorylase Kinase; domain 1 289 399 - -
Lapu6g02229 639 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Lapu6g02229 639 FunFam Cysteine-rich receptor-like protein kinase 2 289 399 - -
Lapu6g02229 639 SMART serkin_6 323 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02229 639 FunFam Cysteine-rich receptor-like protein kinase 2 400 603 - -
Lapu6g02229 639 CDD STKc_IRAK 329 596 - -
Lapu6g02229 639 ProSiteProfiles Protein kinase domain profile. 323 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02229 639 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 624 - -
Lapu6g02229 639 FunFam Cysteine-rich receptor-like protein kinase 2 142 243 - -
Lapu6g02229 639 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Lapu6g02229 639 MobiDBLite consensus disorder prediction 619 639 - -
Lapu6g02229 639 Pfam Salt stress response/antifungal 41 131 IPR002902 -
Lapu6g02229 639 Pfam Salt stress response/antifungal 151 240 IPR002902 -
Lapu6g02229 639 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Lapu6g02229 639 Pfam Protein kinase domain 324 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02229 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Lapu6g02229 639 Gene3D Transferase(Phosphotransferase) domain 1 400 607 - -
Lapu6g02229 639 FunFam Cysteine-rich receptor-like protein kinase 2 29 134 - -
Lapu6g02229 639 SUPERFAMILY Protein kinase-like (PK-like) 307 614 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02229 Lapu-Chr6 21772053 21775781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02229 37 637 Receptor kinase-like Gene Family AT1G70520 37.700 6.80e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g02229 Pkinase 4.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02229 - - vra:106775622 1101.66