Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02225 GAGTATGTACTCCATGGTCAATTATCAAAAAAGGCAGATACATACAGCTATGGGATCGTAGTCCTAGAAATCATAAGTGGTCAAAAGTGTACCGATGTGAAGATTGTTGATGATGATGAATACCTTCTTCGACGAGCATGGAAGTTGTATGAGAGAGGCATGCAGTTGGAGTTGGTGGACAAAAGCTTAGACCCTAATAACTATGATAAGGAAGAAGTGAAGAAAGTTATAGACATTGCTTTGTTGTGCACTCAAGCATCAGCAGCTATGAGACCAGCTATGTCTGAAGTAGTAGTGCTACTGAGTAGCAATGACTTACTTGACCATATGAGACCTTCAATGCCTATCTTTATTGAATCAAATGTGAGACCCCCAAGAGATATCTCTGCCTCAACTGCTTCCTCTCTGTCTAATGCTACTTCTTCCAATTCTATAGTACCTGCTAGATGA 450 0.4044 EYVLHGQLSKKADTYSYGIVVLEIISGQKCTDVKIVDDDEYLLRRAWKLYERGMQLELVDKSLDPNNYDKEEVKKVIDIALLCTQASAAMRPAMSEVVVLLSSNDLLDHMRPSMPIFIESNVRPPRDISASTASSLSNATSSNSIVPAR* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02225 149 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 131 - -
Lapu6g02225 149 Pfam Protein tyrosine and serine/threonine kinase 1 99 IPR001245 GO:0004672|GO:0006468
Lapu6g02225 149 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Lapu6g02225 149 SUPERFAMILY Protein kinase-like (PK-like) 1 127 IPR011009 -
Lapu6g02225 149 MobiDBLite consensus disorder prediction 128 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02225 Lapu-Chr6 21753355 21753959 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02225 1 104 Receptor kinase-like Gene Family AT1G56120 47.115 7.52e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g02225 PK_Tyr_Ser-Thr 2.2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02225 - - gmx:100787379 229.95