Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02224 ATGTTACGACTCATGCTATTGGCCTTAACCTTGATATGGTGGAGCAGTGGTGTTGAATATGCAGATGCAGCCACACAGAAAACACGTCTGATAAACACTGGGTGCAGTCCATTCAACTCTTCCAACGTGCATAGCTTCTTTGCAAATGTGAATGATACATTTTCAGAGATGAGAGCAGAAGTTAGCAACCAAAGCAAACACTTTGCCACATCACAGAAATCCAGGGGAGGGGTCCTCACATATTCAATGTTTCAATGCAGAAACTATCTCTCCAAAAATGATTGTCTTGCTTGCTTCAACACTGCCTCCACCCAAATCCGCAACTGCTCCAAAGCCAATGGCGCCAGAGTTATCTACAATGATTGCTTCCTCAGGTATGAGAGCGAGAGGTTCTACCAACAGACCAATGAACTTGGAAATGGGGTAACATGTGGCAACACGAGTTCAAACACCACTCATGATTTGAAAGTAGTTGGACAACAAGCTCTAACCGATATTCAAACAGCAACACCTAAGACTAAAGGTTTTTATGCAGCTACTACGACAAAGGTGGATGGTGGTAGTGCAATTTATGCCATTGCACAGTGTGTTGAAACTGCCGCAGAGAGTGATTGTTTGAAATGCATGCAAGTTGCTTACAACAACTTACAGAGTTGCCTTCCCAACACAGATGGGACAGCATATGATGCAGGCTGTTTTATGAGATACTCCACCACACCTTTCTTTGCTGCTAATCAAACCATTGATATTGGACCCTATTTAAAACAAGGAGGTTCAAGCAAGAAGTGGGGAATTATAGGTGGTGTTGTAGGAGGTTTTGTTCTTCTCCTTCTGTTGTTTGCCTGGAGAATGTCTAGAAAAAGAAACAAGGTTCACAGAGCAGGTGACATATTGGGAGCAACTGAGTTACGAGGCCCAGTTAACTACAAATATAATGATTTGAAAGCTGCAACTAAAAATTTCAGTGTTGAAAATAAACTTGGGGAAGGAGGTTTTGGTGCTGTATACAAGGGTACTCTAAAAAATGGAAAAATTGTTGCCATAAAGAAATTAGTGTTGGGGAAATCAAGCAAGATGGAGGATGATTTTGAGGGTGAAGTGAAACTTATAAGTAACGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGCTGCAGTAAAGGGCAAGAGAGAATTCTGGTATACGAGTACATGGCAAATAGTAGCCTTGATAGATTCTTATTTGGTTCTAAAGGTTCCCTCAATTGGAAACAACGTTATGATATAATTTTGGGCACAGCAAGAGGGCTAGCATATTTACATGAGGAGTTCCACGTGTCCATCATACATAGAGATATCAAGACAGCTAATATCCTTCTAGATGATGATCTTCAACCCAAAATTGCTGATTTTGGTTTGGCAAGACTTCTGCCAGGGGATCGTTCCCATCTCAGCACAAAATTTGCAGGAACATTGCTAATAAATGTTGTTTTATTAACTATGGATTATATGATGCACTTGTCAGGGGATACACAGCACCTGAGTATGCCATGCATGGTCAATTATCAGAGAGGGCTGATACCTACAGCTATGGTATTGTAG 1581 0.4118 MLRLMLLALTLIWWSSGVEYADAATQKTRLINTGCSPFNSSNVHSFFANVNDTFSEMRAEVSNQSKHFATSQKSRGGVLTYSMFQCRNYLSKNDCLACFNTASTQIRNCSKANGARVIYNDCFLRYESERFYQQTNELGNGVTCGNTSSNTTHDLKVVGQQALTDIQTATPKTKGFYAATTTKVDGGSAIYAIAQCVETAAESDCLKCMQVAYNNLQSCLPNTDGTAYDAGCFMRYSTTPFFAANQTIDIGPYLKQGGSSKKWGIIGGVVGGFVLLLLLFAWRMSRKRNKVHRAGDILGATELRGPVNYKYNDLKAATKNFSVENKLGEGGFGAVYKGTLKNGKIVAIKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGSKGSLNWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTANILLDDDLQPKIADFGLARLLPGDRSHLSTKFAGTLLINVVLLTMDYMMHLSGDTQHLSMPCMVNYQRGLIPTAMVL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02224 526 FunFam Cysteine-rich receptor-like protein kinase 2 139 241 - -
Lapu6g02224 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Lapu6g02224 526 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 81 485 - -
Lapu6g02224 526 Pfam Protein kinase domain 322 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02224 526 FunFam Cysteine-rich receptor-like protein kinase 2 27 131 - -
Lapu6g02224 526 Gene3D - 27 131 IPR038408 -
Lapu6g02224 526 Gene3D - 140 241 IPR038408 -
Lapu6g02224 526 ProSiteProfiles Protein kinase domain profile. 321 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02224 526 Gene3D Transferase(Phosphotransferase) domain 1 398 499 - -
Lapu6g02224 526 Gene3D Phosphorylase Kinase; domain 1 284 397 - -
Lapu6g02224 526 FunFam Os07g0541700 protein 398 484 - -
Lapu6g02224 526 FunFam Cysteine-rich receptor-like protein kinase 2 285 397 - -
Lapu6g02224 526 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Lapu6g02224 526 SMART serkin_6 321 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02224 526 Pfam Salt stress response/antifungal 160 238 IPR002902 -
Lapu6g02224 526 Pfam Salt stress response/antifungal 39 128 IPR002902 -
Lapu6g02224 526 SUPERFAMILY Protein kinase-like (PK-like) 309 485 IPR011009 -
Lapu6g02224 526 ProSiteProfiles Gnk2-homologous domain profile. 137 241 IPR002902 -
Lapu6g02224 526 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02224 Lapu-Chr6 21742973 21746104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02224 81 485 Receptor kinase-like Gene Family AT5G40380 40.580 9.08e-92 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g02224 Pkinase 6.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02224 - - gmx:112997608 785.793