Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02223 ATGATGCTGCAACTTAAGGTAGTGGCCTTAATTTTGATATGGTGGAGCAGTGATTGTGTTGAAGATGCAATTGCAGCCCCAGATGCACATTTAGTAAACATAGGGTGCAGCTCCTTCAATGCTTCTGATTTGAGTAGCTTCTTTGCGAATATCAATGGAACGTTTTCAGACATGAGAGAAGAGATTAGTAATCAAAGCAAGCACTTTGGCACAGTACAGAAAGCCAGAGGAGAGGTGCTCACATACGCTATGTTTCAGTGCAGAAACTATCTCTCCAAAAATGACTGTCTTTCTTGCTTCAACACTGCCACCACTAAGATCCGCAACTGCTCCGATGGCAACGGTGCCAGAGTCATCTACGATGGCTGCTTCCTCAGGTATGAGAGCGACATGTTCTACGATCAGACCAATGAAATTGGCAGTGGGGTATCATGTGGGAACATAAGTTCAACTGTCACTGATTTTAGAGTAGCTGGACAACAAGCCCTAATGGACCTCCAAACAGCAACACCCAAAACTACAGATTTTTATGCAGCTACTAAGACACTGGTGGCTGGTGGTAGTGTAATTTATGCTGTTGCACAGTGTGTTGAAACTGCCACTGAGATTAATTGTCTGAATTGCATGCAAGTTGCATACAACAACTTACATAGTTGTCTTCCCAACATAGATGGTAGAGCATATGATGCTGGCTGTTTTATGAGATACTCCACCACACCCTTTTTTGCTGATAATCAGGCCATTGATATTGCACCCTATTTGAAAAAAGGAAAATCGAAAAAGAAATGGGCTATAATAGGTGGTGTTGTAGGAGGTGCTGTTCTCCTCCTTCTGCTCTTTGCCTGGAGAATGTCTAGAAAAAGAAACAAGGTTCCCAGAGGTGACATATTGGGAGCAACTGAGCTGAAAGGTCCAGTTAACTACAAGTATAATGATTTGAAAGCTGCAACAAAAAATTTCAGTGCTGAAAACAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCCGTAAAGAAACTAGTTTTGGGGAAATCAAGCAACATGGAGGATAATTTTGAAGGTGAAGTGAAGCTTATAAGCAATGTTCATCATCGAAATCTTGTTAGACTTCTTGGTTGCTGCAGTAAAGGCCACGAGAGAATATTAGTTTATGAATACATGGCAAATAAAAGCCTTGACAAATTCTTATTCGGTAACAGAAAAGGTTCCCTGAATTGGAAACAACGCTCTGATATAATTTTAGGCACAGCAAGAGGACTAGCATATCTGCATGAGGAGTTCCACGTGTCCATCATACATAGAGATATCAAGACTGCTAATATCCTTCTAGATGATGTTTTTCAGCCAAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTTCCAGAGGATCGTTCTCATCTTAGCACAAAATTTGCAGGAACTTTGGGATACACGGCACCTGAGTATGCAATGCATGGTCAATTATCAGAGAAGGCTGATACCTTCAGCTATGGTATAGTAGTCCTAGAAATCGTAAGTGGTCAAAAGAGTACAGATGTGAAGAATGACGAGGATGGCGACTACCTTCTTCGACGAGCATGGAAACTGCATGAGAGAGGCTTGTACATGGATCTGGTAGACAAGGCAATAGACCCTAATGAATATGATGTAGAAGAAGTGAAGAAAATCATAGAAATTGCTTTGTTATGCACTCAGGCATCAGCTTCGACGAGGCCTACAATGTCTGAAGTAGTAATGCTACTCAAAAGCAAGAGCTTAGTGGAGCACCTGCGACCAACCATGCCTGTGTTTGTCGAAACAAATATGAGGGAAGGCAACTCTACTAGTTCATCAAATGCTACTGCCTCCATTTCTCTTCCATCAGCTCGATGA 1902 0.4169 MMLQLKVVALILIWWSSDCVEDAIAAPDAHLVNIGCSSFNASDLSSFFANINGTFSDMREEISNQSKHFGTVQKARGEVLTYAMFQCRNYLSKNDCLSCFNTATTKIRNCSDGNGARVIYDGCFLRYESDMFYDQTNEIGSGVSCGNISSTVTDFRVAGQQALMDLQTATPKTTDFYAATKTLVAGGSVIYAVAQCVETATEINCLNCMQVAYNNLHSCLPNIDGRAYDAGCFMRYSTTPFFADNQAIDIAPYLKKGKSKKKWAIIGGVVGGAVLLLLLFAWRMSRKRNKVPRGDILGATELKGPVNYKYNDLKAATKNFSAENKLGEGGFGDVYKGTLKNGKVVAVKKLVLGKSSNMEDNFEGEVKLISNVHHRNLVRLLGCCSKGHERILVYEYMANKSLDKFLFGNRKGSLNWKQRSDIILGTARGLAYLHEEFHVSIIHRDIKTANILLDDVFQPKIADFGLARLLPEDRSHLSTKFAGTLGYTAPEYAMHGQLSEKADTFSYGIVVLEIVSGQKSTDVKNDEDGDYLLRRAWKLHERGLYMDLVDKAIDPNEYDVEEVKKIIEIALLCTQASASTRPTMSEVVMLLKSKSLVEHLRPTMPVFVETNMREGNSTSSSNATASISLPSAR* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02223 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Lapu6g02223 633 ProSiteProfiles Protein kinase domain profile. 320 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02223 633 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 620 - -
Lapu6g02223 633 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Lapu6g02223 633 FunFam Cysteine-rich receptor-like protein kinase 2 285 396 - -
Lapu6g02223 633 Gene3D Transferase(Phosphotransferase) domain 1 397 602 - -
Lapu6g02223 633 Pfam Salt stress response/antifungal 153 238 IPR002902 -
Lapu6g02223 633 Pfam Salt stress response/antifungal 40 129 IPR002902 -
Lapu6g02223 633 MobiDBLite consensus disorder prediction 612 633 - -
Lapu6g02223 633 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Lapu6g02223 633 Gene3D Phosphorylase Kinase; domain 1 285 396 - -
Lapu6g02223 633 FunFam Cysteine-rich receptor-like protein kinase 2 397 599 - -
Lapu6g02223 633 SUPERFAMILY Protein kinase-like (PK-like) 305 610 IPR011009 -
Lapu6g02223 633 FunFam Cysteine-rich receptor-like protein kinase 2 140 241 - -
Lapu6g02223 633 ProSitePatterns Protein kinases ATP-binding region signature. 326 349 IPR017441 GO:0005524
Lapu6g02223 633 Pfam Protein kinase domain 321 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02223 633 CDD STKc_IRAK 326 592 - -
Lapu6g02223 633 Gene3D - 28 132 IPR038408 -
Lapu6g02223 633 Gene3D - 141 241 IPR038408 -
Lapu6g02223 633 FunFam Cysteine-rich receptor-like protein kinase 2 28 132 - -
Lapu6g02223 633 SMART serkin_6 320 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02223 Lapu-Chr6 21734834 21739063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02223 2 629 Receptor kinase-like Gene Family AT1G70520 36.744 9.79e-127 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g02223 Pkinase 5.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02223 - - gmx:100801131 962.214