Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02222 ATGTTTGAACTTAAGCTAATTGTGTTAACTATGATGTTGTGGAGCAGTAATATTGTTGAACATGGAGCAAGTGGTGCTCCACAGACACATCTATTAAACACTGGGTGCAGCACATTCAACGCTACTAACGAGCGCAGTTTCTATGCCAATATCAACACATCATTTTCACTCCTTAGAGAAGATATTAGCAATCACAGCAAGCACTTTGGCACAACACAGCAAGCCCTAGGAGATGTTCTCACCTATGCTATGTTTCAATGCAGAAACTATCTTTCCAAAAATGATTGTCTTGCTTGCTTCAACACTGCCTCCACCCAAATCCGCAACTGCTCCAAAGCCAACGGCGCCAGAGTCATCTACGACGGTTGCTTCATCAGGTATGAGAGCGAGAGGTTCTTCGATCAGACCAATGAACTTGGCAGTGGTGTATCATGTGGGAACACCACTTCAAATGCCACTGGTTTTAGATTAGTTGGACAACAAGTTCTTGCAGATATCCAAACAGCAACACCAAAAATCAAAGGGTTTTATGCAGCTACTAAGACACAGGTGACAGCTGGTGGTGATGCAATTTATGCTGTTGCACAGTGTGTTGAAACTGCAACAGAGGCTAAATGTCTGAGTTGCATGCAAGTTGGATACAGTAACTTACATAGTTGTCTTCCCAACACAGAGGGTAGAGCATATGATGCTGGCTGTTTCATGAGATACTCCACCATACCTTTCTTTGCTGATAATCAAACCATTGATATTGCACCCTATTTAAAAAAAGGAGATTCAAGCAAGAAGTGGGCAATAATAGGTGGTGTGGTTGGTGCTGTTGTTGTTCTCCTCTTTGGGTTGTTTGCATGGCGATGGTTTACAAAACCAAAGAGGGTTCCTAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAACTATAAGTATAAAGATTTGAAAGCTGCAACAAAAAAATTCAGTGCTGAAAACAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCTGTAAAAAAACTAGTGTTGGGGAAATCAAGCAAGATGGAAGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTGGTTAGACTTCTTGGTTGTTGCAGCAAAGGCCCAGAGAGAATCTTGGTTTATGAATACATGGCAAATAGCAGTCTTGACAAATTCTTGTTCGCCGACAGAAAAGGTTCCCTCAGTTGGAAACAACGCTATGATATAATTTTAGGCACAGCAAGGGGACTAGCATATCTACATGAGGAATTCCACGTGTCCATCATACATAGAGATATCAAGACTTCTAATATCCTCTTGGATGATGATCTTCAACCCAAAATTGCTGATTTTGGATTGGCAAGGCTTCTGCCAGAGGATCGTTCCCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACAGCTCCTGAGTATGCAATCCATGGTCAATTATCAGAGAAGGCAGATACCTACAGTTATGGCATTGTAGTTCTAGAAATCATAAGTGGTCAAAAGAGTACCGATGTGAAGGGTGATGAGGAAGGTCGTGAATACCTACTTCAACGAACATGGAAACTTTATGAGAGAGGCATGCACTTGGAGCTGGTGGACGAGGCCATAAACCCTAATGAGTATGATGCAGAAGATGTAAAGAAAATCATAGAAATTGCATTGTTATGCACTCAGGCATCAGCTGCAACCAGACCAACAATGTCTGAAGTAGTAGTGCTACTCAAAAGCAAGAGTTTAGTGGAGCACCTGCGACCAACTATGCCTGTGTTTGTTGAAACGAAAATGAAGAGTCGAGAAGGCAAGTCTAGCTCAACCACGGGCTCTTCATCTAATGCTACTGCCTCCATTTCTGTTCTATCAGCGCGATGA 1929 0.4194 MFELKLIVLTMMLWSSNIVEHGASGAPQTHLLNTGCSTFNATNERSFYANINTSFSLLREDISNHSKHFGTTQQALGDVLTYAMFQCRNYLSKNDCLACFNTASTQIRNCSKANGARVIYDGCFIRYESERFFDQTNELGSGVSCGNTTSNATGFRLVGQQVLADIQTATPKIKGFYAATKTQVTAGGDAIYAVAQCVETATEAKCLSCMQVGYSNLHSCLPNTEGRAYDAGCFMRYSTIPFFADNQTIDIAPYLKKGDSSKKWAIIGGVVGAVVVLLFGLFAWRWFTKPKRVPRGDILGATELKGPVNYKYKDLKAATKKFSAENKLGEGGFGDVYKGTLKNGKVVAVKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGPERILVYEYMANSSLDKFLFADRKGSLSWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTSNILLDDDLQPKIADFGLARLLPEDRSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTDVKGDEEGREYLLQRTWKLYERGMHLELVDEAINPNEYDAEDVKKIIEIALLCTQASAATRPTMSEVVVLLKSKSLVEHLRPTMPVFVETKMKSREGKSSSTTGSSSNATASISVLSAR* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02222 642 ProSiteProfiles Protein kinase domain profile. 322 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02222 642 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Lapu6g02222 642 MobiDBLite consensus disorder prediction 614 642 - -
Lapu6g02222 642 Gene3D - 140 242 IPR038408 -
Lapu6g02222 642 Gene3D - 28 132 IPR038408 -
Lapu6g02222 642 FunFam Cysteine-rich receptor-like protein kinase 2 28 132 - -
Lapu6g02222 642 Gene3D Phosphorylase Kinase; domain 1 298 398 - -
Lapu6g02222 642 Pfam Protein kinase domain 323 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02222 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Lapu6g02222 642 FunFam Cysteine-rich receptor-like protein kinase 2 140 242 - -
Lapu6g02222 642 FunFam Cysteine-rich receptor-like protein kinase 2 399 602 - -
Lapu6g02222 642 ProSiteProfiles Gnk2-homologous domain profile. 136 242 IPR002902 -
Lapu6g02222 642 SUPERFAMILY Protein kinase-like (PK-like) 305 594 IPR011009 -
Lapu6g02222 642 MobiDBLite consensus disorder prediction 620 642 - -
Lapu6g02222 642 Pfam Salt stress response/antifungal 147 239 IPR002902 -
Lapu6g02222 642 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Lapu6g02222 642 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Lapu6g02222 642 Gene3D Transferase(Phosphotransferase) domain 1 399 607 - -
Lapu6g02222 642 FunFam Cysteine-rich receptor-like protein kinase 2 289 398 - -
Lapu6g02222 642 SMART serkin_6 322 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02222 642 CDD STKc_IRAK 328 595 - -
Lapu6g02222 642 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02222 Lapu-Chr6 21722462 21727204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02222 1 642 Receptor kinase-like Gene Family AT1G70520 36.947 5.72e-130 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g02222 Pkinase 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02222 - - gmx:100801131 987.638