Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02205 ATGGGTTCTTGGGCTAGAGTATCGGTGTTGACTATTCCATGGTCTACAACCAATGCTGATTCTGCCATGGGCACCAAATGCGGCATCATTTTTTATAAAATGTACAGAAATTCAAATAACAGAAAACTCAGTCTCTCTTTTGCTTGGGATAATTATAAACTTAGGAGTATTGGTGTGATTAAATCAAGCCAAGATGTATCTTATTTTCAAACGGAAGAAGAAGTAGGAACTTGGGAGGAACAAGAAGTAGGAACTTGGGAAGAACCAGATACTGGCAGTGACAGTGAGTCTGATGGTGAGGAAGTTGAAGACTTCTTTGTATCTGAAAGTGATGGGATGAAGACTTCAGTTGATGCTGATGTTAATATAACTTCAAGGGACAACTATGAAGAACTTATTAAGAAAGAGGTTGAACAGCTTTTGGAACCGGAAGAAAGAGCAATATTACAACAGAATGTTACTCCTAACTTGGAAAAAATATCAACTGAAAAATGGAGCCCGCTGCACACTCTTGTGCTATCAATGCAGATGAGTTGCGTGGATAAGCTTCTTGAAAATGGTGTTGACATTGATTTACCTGATAAGGAAGGTCTTACTGCACTTCATAAGGCAATTATAGGTAAAAAAGATACTTTGATTAGCCATCTTTTACGGAGACGTGCAAGTCCACACGTTAAGGATAAGGATGGAGCCACTCCACTTCATTATGCTGCTCAAGTTGGGGCCAAGATGACTGTGAAGTTATTGATCAAGTACAAGGCTGATGTCAATGTTGAAGATAACGAAGGCTGGACCCCCTTGCACGTTGCCATCCAAAGCAGAAATAGAGATATAGCAAAAATATTGTTAGTCAATGGTGCTGATAAGACAAGGAAAAATAAGGACGGAAAAACAGCCCTGGATCTAAGCTTATGTTATGGGAAAGATTTTAAGTCTTATGACCTTGCCAAATTACTGAAGACGGTTCCTGCTGATAGCTTTCTATGA 987 0.3931 MGSWARVSVLTIPWSTTNADSAMGTKCGIIFYKMYRNSNNRKLSLSFAWDNYKLRSIGVIKSSQDVSYFQTEEEVGTWEEQEVGTWEEPDTGSDSESDGEEVEDFFVSESDGMKTSVDADVNITSRDNYEELIKKEVEQLLEPEERAILQQNVTPNLEKISTEKWSPLHTLVLSMQMSCVDKLLENGVDIDLPDKEGLTALHKAIIGKKDTLISHLLRRRASPHVKDKDGATPLHYAAQVGAKMTVKLLIKYKADVNVEDNEGWTPLHVAIQSRNRDIAKILLVNGADKTRKNKDGKTALDLSLCYGKDFKSYDLAKLLKTVPADSFL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02205 328 ProSiteProfiles Ankyrin repeat profile. 196 228 IPR002110 GO:0005515
Lapu6g02205 328 Gene3D - 230 311 IPR036770 -
Lapu6g02205 328 SUPERFAMILY Ankyrin repeat 155 319 IPR036770 -
Lapu6g02205 328 ProSiteProfiles Ankyrin repeat profile. 262 294 IPR002110 GO:0005515
Lapu6g02205 328 SMART ANK_2a 196 225 IPR002110 GO:0005515
Lapu6g02205 328 SMART ANK_2a 262 291 IPR002110 GO:0005515
Lapu6g02205 328 SMART ANK_2a 163 192 IPR002110 GO:0005515
Lapu6g02205 328 SMART ANK_2a 295 328 IPR002110 GO:0005515
Lapu6g02205 328 SMART ANK_2a 229 258 IPR002110 GO:0005515
Lapu6g02205 328 ProSiteProfiles Ankyrin repeat profile. 163 195 IPR002110 GO:0005515
Lapu6g02205 328 Gene3D - 130 229 IPR036770 -
Lapu6g02205 328 ProSiteProfiles Ankyrin repeat profile. 229 261 IPR002110 GO:0005515
Lapu6g02205 328 MobiDBLite consensus disorder prediction 78 101 - -
Lapu6g02205 328 Pfam Ankyrin repeats (3 copies) 177 260 IPR002110 GO:0005515
Lapu6g02205 328 Pfam Ankyrin repeats (3 copies) 262 319 IPR002110 GO:0005515
Lapu6g02205 328 ProSiteProfiles Ankyrin repeat region circular profile. 229 261 - -
Lapu6g02205 328 ProSiteProfiles Ankyrin repeat region circular profile. 262 288 - -
Lapu6g02205 328 PRINTS Ankyrin repeat signature 278 292 IPR002110 GO:0005515
Lapu6g02205 328 PRINTS Ankyrin repeat signature 230 245 IPR002110 GO:0005515
Lapu6g02205 328 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 83 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02205 148 288 Ion Channels AT2G25600 30.496 1.83e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02205 - - gsj:114380843 512.686