Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02201 ATGAATATGGCTCCTGTTTCACTGCCTCCTGGGTTTAGGTTCCACCCCACAGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATAAATGGTCGTAAGATTGAGCTAGAAATCATCCCTGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCAGCCCTCGAGATAGGAAATACCCAAATGGATCAAGAACAAATCGTGCAACCAAATCTGGCTACTGGAAAGCCACAGGGAAAGACCGTAAGGTGAATTCTCAGAGTTGTGCAATAGGAATGAAGAAAACCCTAGTTTACTATCGAGGTAGGGCACCACATGGTTGTCGCACAGGTTGGGTTATGCATGAGTACCGTCTTGATGAGACACAGTGTGAAACCAATACAGGCTTGCAGGATGCATATGCTCTTTGTCGTGTGTTCAAGAAGACTGCAGTTATTCCTCCAAAAGTTGGAGATCAACACTTTGTTAACGTTGTCACCACCAGCCATGCAAATCAGATCATTGGAAGTGATCAATCAGAAAGCATTAACGAACTATACTCTGAAGGTAGAGGTGAAGTTTTAGAGAGCTCAAATTATTTGATGCCATTGGGTACATGCCCATCCCCAAACATGAATGGGAGTGCTTTCAATATCAATGGTGGAACAAGGGATAATGAGACAACATGGTCACATTTCTTATCAGAAGACTTGCTCAATCTTCCAACAACATCCACTTCTACATTTCCCAACTATGGATCCATGAGTTATCCTCCATCAAAGGTGGATGTGGCTCTAGAGTGTGCAAGGATGCAGCATAGGTTTACCATGCCTCCATTGCAGATGCAGGAGTTGGAGTTCCCTCAAGGTGGCATTTCCGAGCTGAAGATGGCACAGGCCTCGAGTTCCATTTGTGGAACCAGAAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCCCAGGAATTAATAAATCAATCCAACTACTCATCACAACCATTCATGAATGCCAATGAAAATTATGCTCCTCATGAAAGTGACTTTACTTTTATGGTTGGCACCAATTACAATCATGTCAACCATATGAACACCATGGGATTTGTTGACAAAGCATGGGAAAACCAAAACACAAGATCAATAGAGATTGGAGATCTTGATGATGGATTCAAGACAGAGAGGGCGGTGGAGAACTTAAGATGGGTGGGAATGTCCTCCAAAAATGTGGAAAAGAGCTTTATGGAAGAGCAAAATATTGTTCCAATTGAAGATGTCTCAAAGTTCCAAACTAATACAGAAGAAAACGTGGTGAAAGTAGGATTTGAGAAACACAGTTGTAACAAAGAAATAACAGATACTGACATTGACGATTTCTCAATGGGATTCATGAATGATGAGGACCCCAATGAGAACTTCCTAAATGAGGAAAACATTGACTATTCAAATTCCACAAACTTTGAGGTTGTTGAGGAAACAAAAACCAACCATGGAATGTTTGTCTCCAGTCATCAAGTAGCTAATACATTCTTTCATCAAATAGCTCCATCACAAACTGTCAAAGTTCAACTCAATCCAGTAATGGCTAGCAATCAATCAATAGAGAATGCAAATATTAACCAACAAGGACCCTCTTTTAGAAAGCTTAAGGCCTATATGACAGGGAAGCTAATAAAGCCATCAAGCACAATAGCAAGTGCCCTTGAATTCATCTGTGCACTTTTGTTGATGCATTGTGTTTTTTTAAAGGAATTAGTGGAAGATTGGAAACCAGACCTTAAACGTTGTGGCGGTGTTTATACCATGAAGAAAATGAGACAAGCAGCAGAGACTGTCACCAGGAATGAACAAGAAAAAGTTTGGTTGGTTGGTGTGAAATATGGGAACGGATTTAGCATGGTGCTAAAGAAGATAAGCATTTTCCTTACTATATCACTGGCTCTGTGTACCATGTGGGCTAACCATATCATAGTTGACTCTTAG 2016 0.4053 MNMAPVSLPPGFRFHPTDEELVSYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSCAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNTGLQDAYALCRVFKKTAVIPPKVGDQHFVNVVTTSHANQIIGSDQSESINELYSEGRGEVLESSNYLMPLGTCPSPNMNGSAFNINGGTRDNETTWSHFLSEDLLNLPTTSTSTFPNYGSMSYPPSKVDVALECARMQHRFTMPPLQMQELEFPQGGISELKMAQASSSICGTRNETDILQEILSVAHASQELINQSNYSSQPFMNANENYAPHESDFTFMVGTNYNHVNHMNTMGFVDKAWENQNTRSIEIGDLDDGFKTERAVENLRWVGMSSKNVEKSFMEEQNIVPIEDVSKFQTNTEENVVKVGFEKHSCNKEITDTDIDDFSMGFMNDEDPNENFLNEENIDYSNSTNFEVVEETKTNHGMFVSSHQVANTFFHQIAPSQTVKVQLNPVMASNQSIENANINQQGPSFRKLKAYMTGKLIKPSSTIASALEFICALLLMHCVFLKELVEDWKPDLKRCGGVYTMKKMRQAAETVTRNEQEKVWLVGVKYGNGFSMVLKKISIFLTISLALCTMWANHIIVDS* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02201 671 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Lapu6g02201 671 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Lapu6g02201 671 FunFam Nac domain-containing protein 86 17 161 - -
Lapu6g02201 671 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 316 - -
Lapu6g02201 671 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Lapu6g02201 671 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02201 Lapu-Chr6 21521432 21525422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02201 3 662 NAC Transcription Factor Family AT1G65910 44.122 1.14e-161 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu6g02201 NAM 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02201 - - gsj:114381841 1063.52