Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02197 ATGCAGTGTGATCCAACACAACCTTATTTTTATTGTCTTGTTTATGCAGAATCAAGGGCTATTATAAGATACTATGCAACAAAATATGCAGACCGTGGTGCTGACCTATTGGGTAAAACCTTAGAGGAAAGGGCTTTGGTGGAGCAGTGGCTTGAAGTAGAAGCACACAACTTCAATAATTTGTGCTTCACTATAATGCTTCAGCTTGTGATCCTACCAAGGATGGGTAAGGTTGGGGACCTGGCCTTGGCAAACAAATGTAAGAAGGATATTGGGAAGGTGCTGGATGTGTATGAAAGTAGGCTCTCTGAAAGCACATATCTTGCAGGAGATCATTTCTCTTTGGCTGATCTCAGCCACCTTCCAGGGCTTGGACATCTCATTGAGGAAGCCAAACTTGGCCACTTGGTCACTGAGAGGAAGAATGTCAATGCTTGGTGGGAGAAAATTTCAAGGAGGCCAGCTTGGAATAAGTTAAAGGATCTGTTCACTGAAAGGATCAGTCGAGTTATTATATAG 519 0.4297 MQCDPTQPYFYCLVYAESRAIIRYYATKYADRGADLLGKTLEERALVEQWLEVEAHNFNNLCFTIMLQLVILPRMGKVGDLALANKCKKDIGKVLDVYESRLSESTYLAGDHFSLADLSHLPGLGHLIEEAKLGHLVTERKNVNAWWEKISRRPAWNKLKDLFTERISRVII* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02197 172 SFLD Glutathione Transferase (cytosolic) 14 153 IPR040079 -
Lapu6g02197 172 Gene3D - 38 159 - -
Lapu6g02197 172 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 40 170 IPR010987 -
Lapu6g02197 172 Pfam Glutathione S-transferase, C-terminal domain 78 154 IPR004046 -
Lapu6g02197 172 PANTHER GLUTATHIONE S-TRANSFERASE RHO 13 160 - -
Lapu6g02197 172 FunFam Glutathione S-transferase F2 38 160 - -
Lapu6g02197 172 CDD GST_C_Phi 42 160 IPR034347 -
Lapu6g02197 172 SUPERFAMILY GST C-terminal domain-like 32 159 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02197 Lapu-Chr6 21490104 21493331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02197 17 162 Glutathione S-transferase Gene Family AT3G03190 55.479 2.95e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02197 K00799 - gmx:100796010 265.774