LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu6g02195	ATGCCGCCGCCCTTCTTCATGGTGTTTCTATGTTTTCTCAATGCCTGTTCTTCTGTCTTCGCCATCCAATTTGACTTTGGAACTTTAACAATGAGCACCCTGAAGCTTCTCGGCGATGCCCATTTGATCAACAACACCCTCAGCCTCACCGGCGACCCCGCCGTCCCAAACTCCGCCGCCGGCAGAGCGATTTACTCCGCCCCCGTCAGATTCCGGCAACCAGGGTCCCCTTCTCCGGCGAGCTTCGCCACCTTCTTCTCCTTCTCCGTCACCAACCTCAACCCCTCCTCCGTCGGCGGAGGCCTCGCCTTCGTCATCTCGCCGGACTCCACCGCCGTCGGAGATTCTGGCGGCTTCCTCGGTCTTCAAAACGCCTCCGCCGCCACTGGCGGTGGCGGCGGGTTCATTGCAGTTGAATTCGACACCCTGATGGACGTGGAATTCAGCGACATTAATGGAAACCATGTGGGGTTGGACTTAAACAGCGTTGTTTCTGCTCAAGTTTGCGACTTGGGAAGCGTGGGAGTGGATCTCAAAAGCGGTGACTCGGTGAACGCGTGGATCGAGTACGATGGAAGCAGCAGAGGGTTGTGCGTGTGGGTCTCGTACTCGACTGTGAGGCCGAAAGATCCGATTTTGAAGGTGGATCTCGATGTGGGTATGTATGTTAATGATTTTATGTACGTGGGGTTTTCTGGGTCTACCCAAGGTAGCACCGAGGTGCACAGTGTTGAGTGGTGGAGTTTCAATTCCTCTTTCAATTTCGCGGCGGCTCCTGCCGCCACGTCAGCACCCTCTGCCACGTCAGCACCTGAGCAGAAGGAGAGTAAGTCTTCTAGGAAGGGTACTGTGGGGGCAGTTGCTGGGGTTGTGACTGCTGGTGCTTTTGTTCTTGCTCTCTTTGCTGGCGCATTGATTTGGGTGTATTCTAAGAAGGTGAAGCGGGTGAAGAAGTTTGATCATTCAATTGAGTCGGAGATTATTAGAATGCCTAAGGAGTTCACCTACAAGGAGCTGAAATTTGCCACTAAGGGGTTCAGTGATAATAGGGTCATTGGTCATGGAGCTTTTGGGACTGTGTACAAGGGTGTGTTGCCTGATAGTGGTGACACTGTTGCGGTGAAGAGGTGTAACCATAGTGGTCAGGGTAAGAGTGAGTTTTTGTCTGAGTTGTCTATAATTGGGAGTCTTAGGCATCGGAATTTGGTTCACCTTCAAGGTTGGTGCCATGAGAAAGGTGAGATTTTGTTGGTGTATGACTTGATGCCCAATGGGAGTTTAGACAAGGCTTTGTATGAGGCTAGGATGCCTTTGTCATGGCCTCACAGGCTCAAAATTTTGTTAGGTGTGTCATCTGTGTTGGCTTACTTGCATCACGAATGTGAAAACCAGGTAATTCATAGGGACATTAAGACTAGTAACATTATGTTAGATGAAGGGTTCAATGCTCGGTTAGGCGATTTTGGTTTAGCAAGACAAACAGAACATGACAAGTCTCCTGACGCCACTGTGGCTGCTGGAACAATGGGGTACCTTGCGCCAGAGTATGTTCTTACTGGTAGAGCCACAGAGAAAACTGATGTGTTTAGCTATGGTGCTGTGGTTCTTGAGGTGGCCAGTGGAAGGAGGCCTATTGAGAAAGATGCTGCTGCAAATGGTAAAGTTGGGGTTAGCAGCAACTTGGTGGAATGGGTTTGGAGTTTGCATCAAGAAGGTAAGTTGCTAACGGCAGCTGATCCAAGGCTAGAAGGTGAGTTTGAAGAAGGGGAAATGAGGAGGGTACTCTTAGTTGGGTTAGCTTGTTCACACCCTGATTCAATGGCAAGACCAACTATGAGGGGTGCGGTTCAGATGCTGCTTGGTGAGGCTGAAGTGCCTATTGTCCCAAGAGCCAAGCCATCTACTAGTTACAGTACTTCTCATCTCTTATTGAGCTTGCAAGATAGTGAATCTGACTGTAATAATGCTATGATCACCATCTCTACCTCTTCATCAGAGAACAGCCTCAATGGCAAACATATGGTCTGA	2028	0.4985	MPPPFFMVFLCFLNACSSVFAIQFDFGTLTMSTLKLLGDAHLINNTLSLTGDPAVPNSAAGRAIYSAPVRFRQPGSPSPASFATFFSFSVTNLNPSSVGGGLAFVISPDSTAVGDSGGFLGLQNASAATGGGGGFIAVEFDTLMDVEFSDINGNHVGLDLNSVVSAQVCDLGSVGVDLKSGDSVNAWIEYDGSSRGLCVWVSYSTVRPKDPILKVDLDVGMYVNDFMYVGFSGSTQGSTEVHSVEWWSFNSSFNFAAAPAATSAPSATSAPEQKESKSSRKGTVGAVAGVVTAGAFVLALFAGALIWVYSKKVKRVKKFDHSIESEIIRMPKEFTYKELKFATKGFSDNRVIGHGAFGTVYKGVLPDSGDTVAVKRCNHSGQGKSEFLSELSIIGSLRHRNLVHLQGWCHEKGEILLVYDLMPNGSLDKALYEARMPLSWPHRLKILLGVSSVLAYLHHECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYVLTGRATEKTDVFSYGAVVLEVASGRRPIEKDAAANGKVGVSSNLVEWVWSLHQEGKLLTAADPRLEGEFEEGEMRRVLLVGLACSHPDSMARPTMRGAVQMLLGEAEVPIVPRAKPSTSYSTSHLLLSLQDSESDCNNAMITISTSSSENSLNGKHMV*	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu6g02195	675	ProSitePatterns	Protein kinases ATP-binding region signature.	352	375	IPR017441	GO:0005524
	Lapu6g02195	675	Gene3D	-	20	267	-	-
	Lapu6g02195	675	SUPERFAMILY	Concanavalin A-like lectins/glucanases	22	253	IPR013320	-
	Lapu6g02195	675	Gene3D	Transferase(Phosphotransferase) domain 1	422	625	-	-
	Lapu6g02195	675	CDD	STKc_IRAK	352	619	-	-
	Lapu6g02195	675	FunFam	L-type lectin-domain containing receptor kinase VIII.1	422	637	-	-
	Lapu6g02195	675	ProSitePatterns	Legume lectins beta-chain signature.	136	142	IPR019825	-
	Lapu6g02195	675	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	465	477	IPR008271	GO:0004672\|GO:0006468
	Lapu6g02195	675	SMART	serkin_6	346	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu6g02195	675	FunFam	L-type lectin-domain containing receptor kinase VIII.1	309	421	-	-
	Lapu6g02195	675	Pfam	Protein kinase domain	347	569	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu6g02195	675	SUPERFAMILY	Protein kinase-like (PK-like)	328	655	IPR011009	-
	Lapu6g02195	675	FunFam	L-type lectin-domain containing receptor kinase VIII.1	20	263	-	-
	Lapu6g02195	675	ProSiteProfiles	Protein kinase domain profile.	346	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu6g02195	675	Gene3D	Phosphorylase Kinase; domain 1	307	421	-	-
	Lapu6g02195	675	CDD	lectin_legume_LecRK_Arcelin_ConA	22	253	IPR001220	GO:0030246
	Lapu6g02195	675	Pfam	Legume lectin domain	22	258	IPR001220	GO:0030246
	Lapu6g02195	675	PANTHER	-	45	629	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu6g02195	Lapu-Chr6	21468964	21471514	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu6g02195	5	659	Receptor kinase-like Gene Family	AT3G53380	64.399	0.0	860

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lapu6g02195		Pkinase	5.9e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu6g02195	-		-	var:108341139	1200.65