Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02180 ATGGGGATCGATCTTAAGGCTGGGGGTAAGAGCAAAAAGACCAAAAGAACAGCACCCAAGTCCAACGACATCTACCTCAAACTACTTGTCAAGCTTTACCGCTTCCTTGTTCGAAGGACTGGAAGCAATTTCAATGCTGTGATACTCAAGCGCTTGTTCATGAGCAAAGTGAACAAGCCTCCTATTTCTTTGTCGAGGTTGATTAAGTATACAAAGGGGAAGGAAGATAAGATTGCTGTTATAGTGGGGACTGTAACTGATGATATCAGAGTATACGAAGTTCCAGCATTGAAAATTACAGCACTCAAGTTTACAGAGAGAGCACGTGCAAGAATAGAAAAGGCAGGCGGAGAATGCTTGACGTTTGATCAGCTTGCCCTTAGGGCTCCTTTGGGACAAAATACGGTCCTTTTGAGAGGCCCCAAGAATGCTCGGGAAGCTGTGAAACACTTTGGTGCTGCTCCTGGTGTGCCACACAGCCATACCAAACCCTATGTACGATCTAAGGGAAGAAAGTTTGAGAAGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAGAGTTTAA 564 0.4504 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPISLSRLIKYTKGKEDKIAVIVGTVTDDIRVYEVPALKITALKFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGAAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02180 187 Gene3D - 1 187 - -
Lapu6g02180 187 FunFam 60S ribosomal protein L18 1 187 - -
Lapu6g02180 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Lapu6g02180 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Lapu6g02180 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02180 Lapu-Chr6 21380913 21383447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02180 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.957 1.72e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02180 K02883 - gmx:100527681 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02180 6 21380913 21383447 Lapu7g00397 7 4712011 4715492 PCT