Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02165 ATGAGGTTCATCATTACCTTGTTGGTGTTCCTATCATTGCAAAGAGCCAACATTTTGACTGTGGATGCTGCGTTGCATGCCGCAGGAAATGAAAATCAAATCAAGAAAACCTCAGGGGTGGATGAGAATGAAAACAAGGAAACTCCTAGACTTGAAAACTTCAGAACTTTGCCTGGACTCAAGTCACTCAACAGGTTTCACACAAGAAGGACATGCTGTAGCGTATTTTACTCTGACTTTGTGTCCCTCTCAGCTTCTCTGTCACCCAAAACCAAAGCTGAGGCTCCGAATTCGGGGCTGCACGTGCACCCAGGTTCCTATCACTCAGATAGGAGCATGCCACTTCACAAGATTCAACAACAAGATAGAGGCAGCGCAAATAGAACAACACTAGTGTCTGTTGTAGTATCTGGTGGAGTTGCTACCTTAATCTGTGCACTCGGGTGTGTCTGTTTTTGCAAGAGATTGAGAAATCAGAAACGGAAACCCAATAGGACAATGCCACTCTTTAGCCAGAACGGAAGAACAGGAGGTATGTACCATAATTCATCAAGCCATGTGAATTTAAACTCTGACCCTGATTTGCTTTACTTGACACAAACTTGTGAAACACAAAATAGCCCTTCAAGTCATAGTTCCCTAAAACGTGAAATTTATGAGAAGAAAGTGTTGAATCAAGAAGAATATGACAATGCTAACACTGGTAGTTCTTCCACCAAGGAAACACTCTCTGTTCACGAGGATTTGGAATATGACGGTGGCAAAGCTTTTTCTGGAGAAAAAACTGTTCCTGAAGAATGTCATTCATCGTCAGATTACGAAAGTTTTCATTCATGCGTTGATTCACATTCATTAATAAGTGAAACAGAACCACTGTTTCTCTCTACAAGAAATTTAACTTCTGCGACAACTCAACTTCCTTGTTCTTCTCACAATTCAACTTCAAAGGTAGAATCTAACCAATCAACATTCATTCCAAAACATGAAGAGCAAAAGAGGAGTGAAATTTGCCAACCTAGCATTCCTCCCCCTCCATGTCCACCTCCGTTTTTGAAAGAAAACATTAAAACCTCGGCTTCTCAACAACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCCACGCCAGATCGAACAATGGTATGGGATACGCTACGAACAAATTCGTTTGAGTTGGATGAGGTAATGATCGAGTCACTCTTTGGCTACAATTTACAAAATTCAATGAAGAACAACGAAACAAAGAGTAAAACCCCGTCTCCTAACAAGCATGTACTTGAGCCAAAACGGTTGCAAAACATAGCAATACTCTCTAAAGCTCTAAATATCACAGCCGAAGAAGTATGCGAGGCCCTGATACTAGGGAAGGGTTTGTCTTTGCAACAACTGGAGGCACTGGTGAAAATGGTACCCACGAAGGAAGAAGAGGATAAGCTCTTAAACTACAAAGGACGTGTCAATGAACTTGGGTTCGCAGAAAATTTTGTGAGAGTAATGCTTAGCATACCATTTGCCTTTCAACGTGTTGAAGCTATGCTTTACAGAGAAACTTTCGAAGATGAAGTGGCTCACCTCAGTAACTCTTTCACAATGCTAGAGGAAGCGTGCAAAGAACTAAGGTCAAGCAAGTTCTTCTTGAAATTGCTGGAAGCAGTGCTGAAAACAGGAAACCGAATGAACGTGGGGACAACCAGGGGAGGTGCTAGAGCCTTCAAACTTGATGCCCTTCTCAAGCTTGCTGATGTAAAAGGAACAGATGGTAAAACCACCTTGCTCCATTTCTTTGTTCAGGAGATAGTTCGCTCAGAAGGAACCAAAGCTTCAAAGAGCATCATGGGGGAGAAGAGTGAAAACAGAACGGAGGAAGAGAAGGAAGAAGATTACATAAGAATGGGACTAAAACTTGTCTCTGGTCTTAGTGCTGAGTTATGCAATGTTAGAAAGACTGCCACAATTGACTTAAACGTGCTTGCAAGTTCTGTCTCGAACCTATCAAGTGGGTTGGCTAAGATGCAGAACCTAGTAAAAGGGTTGTTGTGCGAAGATGAAAAAAATAAGAGCTTTGTGATTTCTATGAAGTGGTTTCTGAATTATGCAGAAAGAAAGGTAGAAGAGTTGCATGAAGATGAAGGTAGAATGATGGGTCTTGTAAGAGAAATAACTGAGTATTTTCATGGGGATGTGAGTGAGGAAGAGCCTAATCCACTTCAAATCTTTGTAATTGTGAGGGACTTTGTGGAGATGGTAAATAATGTGTGCAATGGGCTTAAAAGGTCTATGAAATCCCCTGTTAAGTTTGGATAG 2310 0.4147 MRFIITLLVFLSLQRANILTVDAALHAAGNENQIKKTSGVDENENKETPRLENFRTLPGLKSLNRFHTRRTCCSVFYSDFVSLSASLSPKTKAEAPNSGLHVHPGSYHSDRSMPLHKIQQQDRGSANRTTLVSVVVSGGVATLICALGCVCFCKRLRNQKRKPNRTMPLFSQNGRTGGMYHNSSSHVNLNSDPDLLYLTQTCETQNSPSSHSSLKREIYEKKVLNQEEYDNANTGSSSTKETLSVHEDLEYDGGKAFSGEKTVPEECHSSSDYESFHSCVDSHSLISETEPLFLSTRNLTSATTQLPCSSHNSTSKVESNQSTFIPKHEEQKRSEICQPSIPPPPCPPPFLKENIKTSASQQLPKLKPLHWDKVRATPDRTMVWDTLRTNSFELDEVMIESLFGYNLQNSMKNNETKSKTPSPNKHVLEPKRLQNIAILSKALNITAEEVCEALILGKGLSLQQLEALVKMVPTKEEEDKLLNYKGRVNELGFAENFVRVMLSIPFAFQRVEAMLYRETFEDEVAHLSNSFTMLEEACKELRSSKFFLKLLEAVLKTGNRMNVGTTRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIVRSEGTKASKSIMGEKSENRTEEEKEEDYIRMGLKLVSGLSAELCNVRKTATIDLNVLASSVSNLSSGLAKMQNLVKGLLCEDEKNKSFVISMKWFLNYAERKVEELHEDEGRMMGLVREITEYFHGDVSEEEPNPLQIFVIVRDFVEMVNNVCNGLKRSMKSPVKFG* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02165 769 Pfam Formin Homology 2 Domain 360 751 IPR015425 -
Lapu6g02165 769 MobiDBLite consensus disorder prediction 333 353 - -
Lapu6g02165 769 ProSiteProfiles Formin homology-2 (FH2) domain profile. 356 769 IPR015425 -
Lapu6g02165 769 MobiDBLite consensus disorder prediction 304 322 - -
Lapu6g02165 769 MobiDBLite consensus disorder prediction 304 323 - -
Lapu6g02165 769 PANTHER FORMIN-RELATED 54 762 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu6g02165 769 Gene3D Formin, FH2 domain 371 765 IPR042201 -
Lapu6g02165 769 SMART it6_source 356 766 IPR015425 -
Lapu6g02165 769 SUPERFAMILY Formin homology 2 domain (FH2 domain) 342 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02165 Lapu-Chr6 21274774 21277574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02165 342 759 FH2 protein (formin) Gene Family AT3G05470 68.794 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02165 - - gmx:100805407 1086.25