Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02105 ATGGAGTGCAACAAGGATGAAGCTATGAGGGCTAAGCAGATTGCTGAAAATAAGATGCAAGCCGGTGACTATGAAGGGGGGCTGAAATTTGCTACAAAAGCCCAAAGGCTGTTTCCTGATATTCTGAACATTGTTCAGATCCTTGCAGTTTGTGAGGTCCACTGTGCCGCACAGAAGAAACACTCTGGTTCTGACATGGACTGGTATGGAATTCTTCAGACTCAACAATCTGCCAGTGAAGCAACCATTAAGAAACAGTATAGAAAGCTTGCACTACTACTTCATCCTGATAAAAATAAATCTGCTGGTGCAGAGGCCGCTTTCAAATTGATCGGTGAAGCTAACAGAGTTTTAAGTGACCAATCGAAGCGGACTTTGTATGACTCAAAGCTTGGAATTTCTGTGGGAAATACAGCAGCTAAGGTTGCACCTTGTCACCCAAATGGAAATGCTTCTGGGACAAGATGTGATGGAGATGCGAGGAATTATCAGAACAGTTTTAATTCACAGCCCCATGTTTGGAATCCGTTTAATCGGGTTGAAAATCAGACATTCTGGACATGTTGCTCTCATTGTAGTACTAGATATCAATATTACAAAACTATTTTAAATCGGACCATACGCTGTCAACAATGTTCTAAATCCTTTACAGCTCATGATATGGGGAACCACAATGTGCCACCAACATATTGGTCACCTTTTAATAACCACAAAGAGTCTGTAAAACATGCATCGTCTAAAGAAGCATCAAAAAGCAATGGTGGAAAATCTCTTGGTAGAGAAGAGGAGGGCGTGTCCATGTCAAAATGCACTGCCGGAGTTGGTGCCTATTCTAAAGTTGCAAACAGCAGAAATGGCCATGTGGCTGCAGGAGTGACAAAGGCTGGTGTTAAAGTGTCCAAAGCCAAGGAATCGCAAGCCTCAACAAAGGTTGGATGTAAGAGAGCGAGGCAGTCTTCATCAGATGATAATAACAAAGCTGGAAATGGTAAAGGCATGAAAGATACCAATGATCGAGAAAATATGGTTGATCCTCTTAGGAAAACTCCAAGGCAAAAACAGCATGTTCTGTACCCAGAAACCGATAAAGGTGGTGATTCTGGGAGTCCGTCCAAAATGCCTCGACGTGATGAATCATTTACCACCCCTAAAGTAGAGAAAAAAGAAGTGCCAGCAACTGGTGGGTTGTTCAGTAACCTTAATCCAGCCTATTGTGCTACTGGTGTGGGTGGTCAGAATGGAGAGACTAGAAATAAAGCAAGTGCACTACATGAAGAAACAATTTTAAGGAATAAAGCCGAAGTTGAGCAGACAAATGTGCAAGGAAAGGATGTGTTGAACAACTCAGATCTCAATGATAGAAAGTCAAAAGCTGACTATTCTTCTCCACCGAAGTCAAATTTATCTCCCAGTTCAGAGATTTTCTGTCCTGATCCAGATTTCAGTGATTTTGAGAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTATGGGCTATTTTTGATAATAATGATGGTATGCCACGATTCTATGCTCTTGTAAGGAAAGTGTACTCCCCTTTCCAGCTGCGGATTACTTGGCTGGAAGCTGACTCAGATAACCAAGGTGAGATTGACTGGCATGAAGCAGGTTTGCCTGTTGCTTGTGGTAAGTTCCGACTTGGTGGTTCACAGAGAACTTCAGATCGTTTTATGTTCTCTCATCAGATGCATTGCATAAAAGGAAGTGACACTCGCACATATCTGATATATCCAAAGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATCTTGGATGGAGTTCAAATCCAGAAAAGCATTTGGAGCATCACTTTGAATATGTGGAAGTTCTATCAGATTTTGATGAAAATGTTGGCATTGAAGTTGCTTATCTTGCGAAACTGAAAGGGTTTGTTAGTCTCTTTCAGCATACTGTGTTGAATGGTATTAGCTTATTTTGTATTTCACCTCATGAGATGTACAAGTTCTCTCATCGGATTCCTTCATACAAGATGACAGGTGCTGAAAGGAAAGGTGTTCCCAGTGGATCTTTTGAACTTGATCCTGCTGGTCTGCCTACTTGTCTTTTTGAAGTTGGTGATACTGGTGTTGCGAAAATGGATGGAATCAATTGTTCACGCCAGGAATACTTGAACTGTAAAGTTGAAGAGGCAGTGCCTCATGATAGTATTCACAAAGCGAAGTTGCAAGAGAATGTTGACGCTGAAAGAACAGCACAAATCCTCAGAAGGTCTCCCAGGTCTACCCGAAAAATTATGGACAATAGCCAAGCTAGCACTAGTCAATTCGCGGACAGAAAAGATGACATAAACATTGACAGGGACGACACTCCAACAGAGGGAAACACTGCTTCATCTCAGACTAATGAGAGGAAGGTCAGGACACCTCAGAAACATGAGAAAAATAGTTATGATGGAGAGACATTGAAAGCTCGAAAGTCGCCTAGAGATCTAAGCAAGAAAAATGCTCAAGGAGATGCATCTGAGACACCATGTAAGTTGAATGTTAATCATTCAAAAAACAGCAAAAATGTGAAGAGCAGCAACATTTCTCAGTTGGTTGGAGAATCATGTTATGACTTTAAGAAGGAAAAATCTGAAAAGATGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAGGGATCATATGCCCAATACTTACACTCAAATTAAGAAGATTGAATTCACTCCTAGTTTTAGATTGCAGGTTTCCATGCTTGAACCCTGCTCACCACCAAGTGACTTTAAGAAAGCAATATCTTGTGGCACCTTCGAAGTTAAAAAAGCCAAATTACAGATTCTCTCTCCCTCTGCATTCTCTCATCAGTTAAAAGTTGAACCCGCGGTAAATAATAGATATGAAATTTACCCTAGAAAAGGTCAGGTTTGGCTTCTGTACAAGGACCAGAACTATGAGCTGACTTCTTCAAAACAGGGCAGAGGTAAATGGGATATAGTAGAAGTATTAGCAGATAGTGACAAGAGTATACAGGTTATTGTTCTGACGCCACATAGCAACTCTAAGACAATTTTCAAAGCTCCTAGAATTCAGAGATCTAAAACTGGTGTAATTGAAATATTAAGAGAAGAGGTTGGCAGATTTTCACATCAGATTCCTGCTTTTCTGCACAGCGACAATGTGTATCTCAGGGGTTGTTGGGAGCTTGATCCTTCTTCAGTTCCTGGTTCTTTCGGACGAATAAACTGA 3240 0.4102 MECNKDEAMRAKQIAENKMQAGDYEGGLKFATKAQRLFPDILNIVQILAVCEVHCAAQKKHSGSDMDWYGILQTQQSASEATIKKQYRKLALLLHPDKNKSAGAEAAFKLIGEANRVLSDQSKRTLYDSKLGISVGNTAAKVAPCHPNGNASGTRCDGDARNYQNSFNSQPHVWNPFNRVENQTFWTCCSHCSTRYQYYKTILNRTIRCQQCSKSFTAHDMGNHNVPPTYWSPFNNHKESVKHASSKEASKSNGGKSLGREEEGVSMSKCTAGVGAYSKVANSRNGHVAAGVTKAGVKVSKAKESQASTKVGCKRARQSSSDDNNKAGNGKGMKDTNDRENMVDPLRKTPRQKQHVLYPETDKGGDSGSPSKMPRRDESFTTPKVEKKEVPATGGLFSNLNPAYCATGVGGQNGETRNKASALHEETILRNKAEVEQTNVQGKDVLNNSDLNDRKSKADYSSPPKSNLSPSSEIFCPDPDFSDFERDKAEDCFAVNQLWAIFDNNDGMPRFYALVRKVYSPFQLRITWLEADSDNQGEIDWHEAGLPVACGKFRLGGSQRTSDRFMFSHQMHCIKGSDTRTYLIYPKKGETWAIFRHWDLGWSSNPEKHLEHHFEYVEVLSDFDENVGIEVAYLAKLKGFVSLFQHTVLNGISLFCISPHEMYKFSHRIPSYKMTGAERKGVPSGSFELDPAGLPTCLFEVGDTGVAKMDGINCSRQEYLNCKVEEAVPHDSIHKAKLQENVDAERTAQILRRSPRSTRKIMDNSQASTSQFADRKDDINIDRDDTPTEGNTASSQTNERKVRTPQKHEKNSYDGETLKARKSPRDLSKKNAQGDASETPCKLNVNHSKNSKNVKSSNISQLVGESCYDFKKEKSEKMFQCGQIWAIYGDRDHMPNTYTQIKKIEFTPSFRLQVSMLEPCSPPSDFKKAISCGTFEVKKAKLQILSPSAFSHQLKVEPAVNNRYEIYPRKGQVWLLYKDQNYELTSSKQGRGKWDIVEVLADSDKSIQVIVLTPHSNSKTIFKAPRIQRSKTGVIEILREEVGRFSHQIPAFLHSDNVYLRGCWELDPSSVPGSFGRIN* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 753 853 - -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 801 832 - -
Lapu6g02105 1079 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 786 800 - -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 439 472 - -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 229 265 - -
Lapu6g02105 1079 SUPERFAMILY Chaperone J-domain 64 131 IPR036869 -
Lapu6g02105 1079 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lapu6g02105 1079 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lapu6g02105 1079 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lapu6g02105 1079 CDD DnaJ 67 120 IPR001623 -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 369 385 - -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 833 853 - -
Lapu6g02105 1079 Pfam Domain of unknown function (DUF3444) 865 1054 IPR024593 -
Lapu6g02105 1079 Pfam Domain of unknown function (DUF3444) 473 678 IPR024593 -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 294 388 - -
Lapu6g02105 1079 SMART dnaj_3 66 123 IPR001623 -
Lapu6g02105 1079 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1072 - -
Lapu6g02105 1079 Gene3D DnaJ domain 52 143 IPR036869 -
Lapu6g02105 1079 Pfam DnaJ domain 67 128 IPR001623 -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 760 774 - -
Lapu6g02105 1079 MobiDBLite consensus disorder prediction 328 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02105 Lapu-Chr6 20744251 20750364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02105 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.174 2.62e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02105 - - var:108342824 1761.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02105 6 20744251 20750364 Lapu6g02105 6 20744251 20750364 ECH
Lapu6g02105 6 20744251 20750364 Lapu7g00332 7 4156341 4158094 PCT