Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02098 ATGGGTACTGAATTAAGTTACGCGCTTTCAAGAATGCAAATGCTATCCACTTCAGATTATGCCTCCGTTGTGTCCATGAACATTTTTGTGGCTCTGCTTTGTACTTGCATTGTCATTGGCCATCTTCTAGAGGAGAATCGGTGGGTGAATGAGTCTATCACTGCCCTTTTGATAGGTATTTGCACTGGGGTAGTCATTTTGTTGTATAGTCGCGGTAAAAGCTCGCATCTTCTAGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCACCTATCATATTTAATGCCGGGTTTCAAGTGAAAAAGAAACAGTTCTTTGTCAACTTCATGACCATCATCCTGTTTGGAGCTGTTGGTGTCATACAAATTTTTAAGAGAATGGGTGTTTGTAAATCACTGGAGATAGGAGATTATCTAGCAATTGGGACAATATTTGCTGCTACAGATTCTGTGTGCACATTGCAGGTGCTAAACCAGGACGAGACACCTTTACTATACAGTCTTGTATTTGGCGAGGGTGTTGTGAATGATGCTACATCTGTTGTGCTTTTCAATGCAATCAAAAGTTTTGACCTCAACAAAATTGACCACAGAATTGGTTTGCATTTTTTCGGCAATTTCTTCTATCTGTTTACCGCAAGCACAGTGCTTGGTGTCTTGGCCGGTCTACTCAGCGCTTACATTATTAAAACGCTGTATATTGGCAGGCACTCTACAGATCGCGAGGTTGCTCTTATGATGTTAATGGCTTACCTTTCCTACATTCTGGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTCTGTGGGATTGTTATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCGAGAATCACTACCAAACACGCTTTTGCAACTCTCTCATTTGTTCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCGTTGGACATTGAAAAGTGGAGGTTTGCCAGCGATAGGCCAAAAACATCTGTTGCTGTTAGTTCAGTACTATTGGGTCTAGTACTTGCTGGAAGAGCAGCATTTGTTTTTCCCCTATCCTTCTTATCAAATCTCACTAAAAAGTCTCAAAGTGAAAAATTAAGTTTGAGGGAGCAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTGGCCTATAATCAGTTCACCCTGTCGGGTCACACTGAACTGCGAACCAATGCCATCATGATCACCAGCACCATCACAGTTGTGCTTGTCAGCACAATGGTGTTTGGTTTGATGACCAAGCCACTCATAAGGTTTTTGCTGCCTGTTAGTCCACCTCCTAAACGAAAAAACAGCACGGCAAATATAGAATCATCCAATAATCCTCCGAAATCAATCACTGTGCCCTTTCTTGGAGGCTCTCATGATTCTGAAAACGAACTTGATGGCAATGAAGATCATCGTCCAAGCACTATTCGTGACTTACTAAGCACTCCAACACATCATGTTCATCGCTTATGGCGTACGTTTGATAACTCAATCATGCGTCCAGTTTTTGGTGGTAGGGGATTTGTTCCTGTGGCTCCTACCTCGCCAACTGAAGGCAGCGGTATTAGTCAACAGTGGCACTAG 1617 0.4218 MGTELSYALSRMQMLSTSDYASVVSMNIFVALLCTCIVIGHLLEENRWVNESITALLIGICTGVVILLYSRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIILFGAVGVIQIFKRMGVCKSLEIGDYLAIGTIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNKIDHRIGLHFFGNFFYLFTASTVLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFASDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLSNLTKKSQSEKLSLREQVIIWWAGLMRGAVSMALAYNQFTLSGHTELRTNAIMITSTITVVLVSTMVFGLMTKPLIRFLLPVSPPPKRKNSTANIESSNNPPKSITVPFLGGSHDSENELDGNEDHRPSTIRDLLSTPTHHVHRLWRTFDNSIMRPVFGGRGFVPVAPTSPTEGSGISQQWH* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02098 538 Gene3D - 135 187 - -
Lapu6g02098 538 Pfam Sodium/hydrogen exchanger family 28 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu6g02098 538 MobiDBLite consensus disorder prediction 443 462 - -
Lapu6g02098 538 PANTHER SODIUM/HYDROGEN EXCHANGER 14 514 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Lapu6g02098 538 MobiDBLite consensus disorder prediction 442 490 - -
Lapu6g02098 538 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu6g02098 538 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu6g02098 538 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu6g02098 538 MobiDBLite consensus disorder prediction 473 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02098 Lapu-Chr6 20681982 20686033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02098 10 531 Antiporters AT3G05030 73.271 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02098 - - gmx:100789667 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02098 6 20681982 20686033 Lapu6g02098 6 20681982 20686033 ECH
Lapu6g02098 6 20681982 20686033 Lapu7g01371 7 29099408 29106100 PCT