Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02096 ATGGGCGCACAGAAGAAAAGCGGCGCTAGGGTTTCTGAGGACCCCGACGAACTGGTGCGGGTTCCGTTGCAGGCCATTCTCTTGGCCGATAGCTTCACCACCAAGTTTAGACCTATCACACTGGAACGCCCCAAAGTGCTGCTTCCGCTCGTGAATGTTCCGATGATAAATTACACGCTGACTTGGCTCGAATCCGCTGGTGTCGAAGAGGTTTTCGTATTCTGCTGTTCTCACTCCAAGCAGGTCATTAACTACCTCGAGAAATCTGAGTGGCTATCTCAACCGAATTTCACGGTGACCACTATAGAGTCGCAGAACTCTGTCAGCGCCGGAGATGCGCTCCGCGTAATCTACGAGCGCAATGTGATACACGGAGACTTTGTCCTTATCAGTGGAGATACTGTAAGCAACATGTCGCTTACTCAGGCACTTCTAGAGCATAAAGAGAGGAGGAAGAAAGATAGTAATGCAGTAATGACTATGGTCATTAAACGATCAAAACCTAATCCAGCTATCCATCAGTCTCGACTTGGTACTGATGAAATTTTTATGGCTATTGATCCTAATACCAAGCAACTTGTGTATTATGAGGATAGGGCAGACCAATCAAGAGGGACACTACATCTTGACAAGTCATTGCTTGTTGATAATCCTTCACTCTCTCTGCATCATGATAAGCAGGATTGTTACATTGACATTTGCTCACCCGAAGTACTTAGCCTATTTACAGACAATTTTGACTACCAACATCTGCGGCGTCATTTTGTCAAGGGATTGCTTGTTGATGATATAATGGGGTACAAAATTTTTGTTCATGAAATCCACTCTGACTATGCTGCAAGGATTGATAATTTCCGAAGTTATGACACTGTCAGCAAGGATATAATTCATCGGTGGACATATCCACTGGTGCCAGATGTAATGAATTTTGGCCACACAGCTACTAAACTTGAACGACAAGGAATGTACCGTGCTTTGGAAATATCACAATCGCAGTCTGCTGTTATTGGCCCTTTCACTGTCATAGGATCTGGCACCAAAATTGGGAATGACACTAAAATTTCTAATTCCGTTATTGGTGAAGGATGTAAAATTGGGTCAAATGTTATCATAGAGGGATGCTATATATGGGATAACATCAGCATAGAAGATGGCTGTAAACTCCAGCATGCAATTGTATGTGATGGGGTGATTATAAAGTCAGGGGCTGTTCTGGAACCTGGTGTTATTTTGTCTTTTAAGGTTGTAGTTGGGCCAGAGTTTGTTGTTCCTCCATATTCAAAAGTATCTCTCTTTCAGCAGCCAATTGAGGAGGACAGTGACGAGGAGCTTGAATATGCTGATAGTACTAGTGTCAGAGGTAGCCAGGTGGATAAATCAGATACAGAGATTGCTTCCAAAGTATTGGAGACACGTTTCAGTCCTGCTTCGGAGCTAGGTATGGGTGGGGCAGGTCACGTTTGGTCAACATGTGAAGGTGGCCACGAAGAAGAGTGGAGGCACTCAGTGGCGCCTATTCCTAAAGATAAAATTCTGGAGGCAATTAAAACTTTGGAAGATGATCTGGAGTTTACTCATGACGTTTTTCTCCCGCCTTCTGGAGAGCTGAAACCTAATTCCAATGATTCAGATGATGATGATCAGGAAGATTCTAGAGATGACTATTATTACTTTGAGAAAGAGGTTGAAGCAACTTTTCTTAGGGCTGTGCATGAAAACATACAAGAAAGCCATTTGATCTTAGAAATCAATTCTTTGAAGCTGTCATACAATAAACTAACTTCTGATTGTGCTGGGGCTTTATTTTATGCCATGATGAAGTATGCTTTAGACACCCCCCATAGTTCAGCTGATGGTTTGCTTCAAAATGTTCAGGTTGTATTTACAAAGTGGAAAAAGGCTCTTACATCCTATCTGCATGACAAAGATGAGCAGATTGAAGTAATACTAAAATTTGAAGAAATGTGTTTGGAATCGGCTAAGGAGTTTGCTCCATTGTTCACAACGATTTTGCACCACTTGTATAATGACGATGTTGTAGAAGAAAATGCTATTTTGAGTTGGGAAGATGAGAAGAAAGATGCTGACGAGGCAGATAAAGTTTTTGTTAACCAGGCCCAAAAATTCATTCAATGGCTAAAAGAGGCACCCGAAGAAGACGATGATGACGAGGAATAA 2178 0.4224 MGAQKKSGARVSEDPDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCSHSKQVINYLEKSEWLSQPNFTVTTIESQNSVSAGDALRVIYERNVIHGDFVLISGDTVSNMSLTQALLEHKERRKKDSNAVMTMVIKRSKPNPAIHQSRLGTDEIFMAIDPNTKQLVYYEDRADQSRGTLHLDKSLLVDNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGHTATKLERQGMYRALEISQSQSAVIGPFTVIGSGTKIGNDTKISNSVIGEGCKIGSNVIIEGCYIWDNISIEDGCKLQHAIVCDGVIIKSGAVLEPGVILSFKVVVGPEFVVPPYSKVSLFQQPIEEDSDEELEYADSTSVRGSQVDKSDTEIASKVLETRFSPASELGMGGAGHVWSTCEGGHEEEWRHSVAPIPKDKILEAIKTLEDDLEFTHDVFLPPSGELKPNSNDSDDDDQEDSRDDYYYFEKEVEATFLRAVHENIQESHLILEINSLKLSYNKLTSDCAGALFYAMMKYALDTPHSSADGLLQNVQVVFTKWKKALTSYLHDKDEQIEVILKFEEMCLESAKEFAPLFTTILHHLYNDDVVEENAILSWEDEKKDADEADKVFVNQAQKFIQWLKEAPEEDDDDEE* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02096 725 SMART 542_3 632 719 IPR003307 GO:0005515
Lapu6g02096 725 Pfam Nucleotidyl transferase 25 165 IPR005835 GO:0009058
Lapu6g02096 725 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 15 303 IPR029044 -
Lapu6g02096 725 MobiDBLite consensus disorder prediction 529 551 - -
Lapu6g02096 725 FunFam Trimeric LpxA-like enzyme 316 449 - -
Lapu6g02096 725 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Lapu6g02096 725 CDD W2_eIF2B_epsilon 558 716 IPR044123 GO:0005085|GO:0031369
Lapu6g02096 725 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 369 IPR029044 -
Lapu6g02096 725 ProSiteProfiles W2 domain profile. 552 723 IPR003307 GO:0005515
Lapu6g02096 725 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 9 725 - -
Lapu6g02096 725 SUPERFAMILY ARM repeat 558 716 IPR016024 -
Lapu6g02096 725 FunFam Translation initiation factor eIF-2B subunit epsilon 12 303 - -
Lapu6g02096 725 FunFam Translation initiation factor eIF-2B epsilon subunit 548 724 - -
Lapu6g02096 725 SUPERFAMILY Trimeric LpxA-like enzymes 267 429 IPR011004 -
Lapu6g02096 725 Gene3D Hexapeptide repeat proteins 327 462 - -
Lapu6g02096 725 CDD LbH_eIF2B_epsilon 341 419 - -
Lapu6g02096 725 Pfam eIF4-gamma/eIF5/eIF2-epsilon 644 723 IPR003307 GO:0005515
Lapu6g02096 725 Gene3D - 545 724 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02096 1 716 Eukaryotic Initiation Factors Gene Family AT2G34970 64.454 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02096 K03240 - gmx:100784894 1318.14