Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02089 ATGGCATCTGTGGATCTCTCTACTATTAGTCTCCGGCCATTCAAGACTAGTGATGTTGACGATTTCTTCTTGTGGGCAGGGGATGATCAGGTGACTCGAAACCTGCGATGGAAGACATGTGGCACCAGGGAAGAGGCTTTGACCTTCATAAGGGATGTTTGCATACCTCATCCATGGCGTCGCTCAATCTGCGTCGATGATCGCTCCATTGGCTTTGTTTCAGTATATCCCTGGTCAGGTGATGAAAGGCACAAGGCTGACATAGGATATGCTATTGGGAGCAGCTACTGGGGCCAAGGGATAGCCACCAAAGTGCTCAAGATTGCAGTGCCTCAAGTCTTCAAAGACTTTCCCAATTTGCTAAGGTTGCAGGCTTTCGTTGATGTTGAGAACAAAGCTTCTCAGAGGGTGTTGGAAAAGGTTGGATTCACGAGGGAGGGTGTTCTCAGAAAGTACACTTATTTCAAAGGGGTTGTTAAGGATTTTGTTGTGTATAGTTTTTTGTCAACAGATGAAATTCCTCCTTCTGACTAG 534 0.4625 MASVDLSTISLRPFKTSDVDDFFLWAGDDQVTRNLRWKTCGTREEALTFIRDVCIPHPWRRSICVDDRSIGFVSVYPWSGDERHKADIGYAIGSSYWGQGIATKVLKIAVPQVFKDFPNLLRLQAFVDVENKASQRVLEKVGFTREGVLRKYTYFKGVVKDFVVYSFLSTDEIPPSD* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02089 177 Gene3D - 5 173 - -
Lapu6g02089 177 Pfam Acetyltransferase (GNAT) domain 10 144 IPR000182 GO:0016747
Lapu6g02089 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 172 - -
Lapu6g02089 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 165 IPR000182 GO:0016747
Lapu6g02089 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 168 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02089 Lapu-Chr6 20579120 20579653 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu6g02089 Acetyltransf_3 3.7e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02089 - - vra:106775254 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02089 6 20579120 20579653 Lapu6g02089 6 20579120 20579653 ECH