Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02084 ATGGCTTCATCATCTCCCTCTCTATCATTTACAATGCATAAGTGCCAACCTGAGCTAGTGGTTCCAGCAATACCCACTCCCGACGAAACTAAACTACTATCTGACATTGATGATCAAAGCTACCTGCGTTTCCATTATTCAATCATACAAATCTACCAAAATGAATCATCAATGGCGAATAAAGACCCAGTGAGAGTGATTCGGCAGGCACTGGCACATGCACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGTCCTGGACAGAAATTAATGGTGGATTGTACTGGAGAGGGTGTCATGTTTGTTGAGGCTGACGCTGACGTAACACTCGATCAGTTTCGTGGCAATCTCCAACCTCCATTCATATACTCTCAAGAATTTCTATGTCATGTTCCACACTCGGAAGAATTTCAAAAATTGCCACTTCTTCTCATCCAGGTGACACGACTCAAGTGCGGTGGTTTCATCGTGTCCACTGGGTGGAACCACGTGATGGCAGACGGAGCTGGTTTGTCACAGTTCATGAACGCATGGGCTGAAATGGCTCGAGGCATAAAGACTCCTTCCATTTCACCTCTCTGGCGTAGGGAACTCCTAATGGCAAGAGATCCACCTCGCATTACGTGCAACCATCGTGAATACGACCAAATCCAAGACACCCACAATTCTTCCAACCTAAACTTGGTTCATCGATCATTCTTCTTCGGACCTGCTCAGATGGCTGCCCTTCGTCGCTTGCTTCCCCATCACCTTCTACAATGCACCTCATTCGATCTCATCACAGCATGCTTATGGCGTTGTCGCACAAAAGCACTGCAAACAGGCGCGGATGAGGAAGTTCGCATGATGTGCATCGTGAACGCACGTAATAGGTTCCATCCTCCGTTACCTATTGGTTACTACGGCAACGTTTTTGCATACCCCGCGGCAATCACCACCGCAGGGAAGCTCTGCGCAAATCCATTTGCATATGCGGTGGAGTTGATTAATAATGTGAAAGGTGAGGTGACAGAGGAGTATATGCACTCCGTGGCGGATCTAATGGTGCTTAAGGGACGGTGCATGCCCACAAGTGTAAGGTCTTGTCTGGTTTCAGACCTGACACGTGCTAGGTTCAGGGACGTGGATTTTGGATGGGGCAAGGCTTTGTCTGGTGCACCAGCGAAAGGTAGTACTGGACCCTTTTACGGAGGAACACACATTGTGTCGTATAAGAATTCAAAAGGAGAAGATGGGTTGGTGTTACCAGTTTGGTTGCCCGCAAAAGCTATGCCAAGGTTTGTCAAAGAGATGGATGATATGCTGAGTGGCAACCAAAACCAACCTGCAACAACTGCTCCTGCTCTAATCAGGTCTACCATTTAG 1374 0.4774 MASSSPSLSFTMHKCQPELVVPAIPTPDETKLLSDIDDQSYLRFHYSIIQIYQNESSMANKDPVRVIRQALAHALVFYYPFAGRLREGPGQKLMVDCTGEGVMFVEADADVTLDQFRGNLQPPFIYSQEFLCHVPHSEEFQKLPLLLIQVTRLKCGGFIVSTGWNHVMADGAGLSQFMNAWAEMARGIKTPSISPLWRRELLMARDPPRITCNHREYDQIQDTHNSSNLNLVHRSFFFGPAQMAALRRLLPHHLLQCTSFDLITACLWRCRTKALQTGADEEVRMMCIVNARNRFHPPLPIGYYGNVFAYPAAITTAGKLCANPFAYAVELINNVKGEVTEEYMHSVADLMVLKGRCMPTSVRSCLVSDLTRARFRDVDFGWGKALSGAPAKGSTGPFYGGTHIVSYKNSKGEDGLVLPVWLPAKAMPRFVKEMDDMLSGNQNQPATTAPALIRSTI* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02084 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 434 - -
Lapu6g02084 457 Gene3D - 215 434 IPR023213 -
Lapu6g02084 457 Gene3D - 8 214 IPR023213 -
Lapu6g02084 457 Pfam Transferase family 16 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02084 Lapu-Chr6 20520863 20522361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02084 19 391 Monolignol Biosynthesis Gene Families AT5G48930 31.362 3.29e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02084 K19861 - gmx:100792864 645.966