Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02083 ATGGCCTCATCATCTTTAACGTTTACTGTGCAAAGGTGCCAACCTCAGCTTGTGCCTCCTGCTGTTCCCACTCCTCGCGAAATTAAGCTACTTTCCGACATTGATGATCAAGATGGCCTGCGTTTCCAAATTCCAGTGGTACAAGTTTATAGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTGAAGTGATTCGGCGAGCACTCTCACAAACACTTGTCTTCTACTACCCATTTGCAGGAAAGCTCAGGGAGGGGCCTCAACGCAAATTGATGGTGGATTGCACGGGAGAGGGTGCCATGTTCATAGAAGCTGATGCTGACGTCACACTTGATCAATTTGGTGATTCTCTCCACCCTCCATTCCCATGCTTCCATGAACTGCTATACGATGTTCCTGACTCACAACAGATTACCAACACTCCCATTCTACTCGTACAGGTGACACGCCTTAGGTGTGGCGGTTTCATCTTGGCATTCTACTTCAACCACACCATGTGTGATGGAGGTGGTCTTTCACAATTCTTGCACACGTGGGCTGAAATGGCTAGTGGTGTGACCAAACCTTCCATTGCACCTGTGTGGCGTAGGGAACTTCTAATGGCAAGATATCCACCTCGCATTACATGCAACCATCGCGAATACGAGCATGTCCCAGGAACCATCACATCAAACGACCATGACATGGTTCTTCGATCATTCTTCTTTGGACCTTCCCAAATAGCTGCTATTCGTGGCTTGGTTCCACCCCACCTTCAGCGTTGCTCTACGTTTGATGTTATCTCAGCATGCTTCTGGCGTTGTCGTACAAAAGCACTGCAGATTGAGGCAGATGAGGAGGTTCGCATGATGGTGGTAGTGAATGCACGTGGAAGGTTCAACCCTCCTTTACCAGTTGGTTACTACGGCAATGCTTTTGCATTCCCTGCAGCAGTTACCACTGCAGGGAAGCTTTGTGAAAATCCATTTGGGTATGCAGTGGAGTTAATAAATAAAGTGAAGAGTGAGGTGACAGAAGAGTACATGCATTCCGTGGCAGATTTAATGGTGATTAAGGATCGGTGCTTATTTACAACAATAAGGTCTTGTATTATTTCGGATTTGACACGTCTGAAATTTAGAGAAGTGGATTTCGGGTGGGGTGAAGCTGTGTACGGTGGAGTGGCCGAAGGTGGGGCTGGGAGCTTTCTGGGAGCAACCTTTCAAATGTTGCATAAGAATGCAAAAGGAGAAGAAGGCATCGTCATACCAATTTGGTTGCCTGCTGAAGCTATGAATAGGTTTGCAAAAGAGTTGGATCACATGTTTGGGAACCAAAACCAAACTATAACGAGTCCTAGTTTAATCATGTCTGCCTTATAG 1362 0.4648 MASSSLTFTVQRCQPQLVPPAVPTPREIKLLSDIDDQDGLRFQIPVVQVYRKQASMAEKDPVEVIRRALSQTLVFYYPFAGKLREGPQRKLMVDCTGEGAMFIEADADVTLDQFGDSLHPPFPCFHELLYDVPDSQQITNTPILLVQVTRLRCGGFILAFYFNHTMCDGGGLSQFLHTWAEMASGVTKPSIAPVWRRELLMARYPPRITCNHREYEHVPGTITSNDHDMVLRSFFFGPSQIAAIRGLVPPHLQRCSTFDVISACFWRCRTKALQIEADEEVRMMVVVNARGRFNPPLPVGYYGNAFAFPAAVTTAGKLCENPFGYAVELINKVKSEVTEEYMHSVADLMVIKDRCLFTTIRSCIISDLTRLKFREVDFGWGEAVYGGVAEGGAGSFLGATFQMLHKNAKGEEGIVIPIWLPAEAMNRFAKELDHMFGNQNQTITSPSLIMSAL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02083 453 Gene3D - 213 432 IPR023213 -
Lapu6g02083 453 Gene3D - 5 212 IPR023213 -
Lapu6g02083 453 Pfam Transferase family 10 435 - -
Lapu6g02083 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02083 Lapu-Chr6 20516639 20518639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02083 41 432 Monolignol Biosynthesis Gene Families AT5G48930 28.922 1.72e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02083 K19861 - gmx:100792864 663.299