Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02082 TCCTCTCAGATACACACATCCATGGCCGCATCATCTTTAACGTTTACGGTGCGAAGGTGCCAACCTCAGCTGGTGCCTCCGGCTGTTCCCACTCCTCACGAAATTAAGCTACTTTCCGACATTGATGATCAAGATGGCCTGCGTTTCCAAATTCCAGTGGTACAAGTTTATAGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTGAAGTGATCCGGCGAGCACTGTCACAAGCACTTGTGTTCTATTACCCATTAGCAGGTAGGCTGAGGGAGGGGCCTCACCGGAAATTGATGGTGGAGTGCACTGGAGAGGGTGTGATGTTCATAGAAGCTGATGCTGACGTCACACTTGATCAATTTGGTGATTCTCTCCACCCTCCATTCCCATGCTTCCATGAACTGCTATACGATGTTCCTGCCTCCCACCAGATTACCAACACTCCCCTTCTACTCGTACAGATGACACGACTTAGGTGTGGTGGTTTCATTTTGGCA 498 0.492 SSQIHTSMAASSLTFTVRRCQPQLVPPAVPTPHEIKLLSDIDDQDGLRFQIPVVQVYRKQASMAEKDPVEVIRRALSQALVFYYPLAGRLREGPHRKLMVECTGEGVMFIEADADVTLDQFGDSLHPPFPCFHELLYDVPASHQITNTPLLLVQMTRLRCGGFILA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02082 166 Pfam Transferase family 20 165 - -
Lapu6g02082 166 Gene3D - 11 166 IPR023213 -
Lapu6g02082 166 PANTHER ACYL TRANSFERASE 4 15 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02082 Lapu-Chr6 20507682 20509044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02082 24 166 Monolignol Biosynthesis Gene Families AT5G48930 36.986 5.38e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02082 K19861 - pvu:PHAVU_006G098400g 276.174