Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02076 ATGGCATCTCAGCAACACGATGCCGTTTTCCGCGAAGAAGACATGGACGACGACGATGACGACTCTCAGGAGGACGAAGAGTTCGAAGAAGACGACGACGTTTTGGCCGCCGACGATGAAGAAAACGAGCCCTCTTCCTCCGCCGCTCTCGCCGTCACCGTCGCCGTCCCCGGTTCCGCCATCTCAAACGGCGGAGCTGCTCCACTTTCGACGCCCACCCCCACCACCATCGTCATCGCCGACTCCTCCGATCCGAAGAGGCGGCGCGTGGAGGCAGTCGAGGAGAAGAAGCCGCCGCTTGACGACTCGCGGCGGCTGTTCCAGCGGCTATGGACCGACGAGGACGAGATCGAGCTGCTGCAAGGGTTCCTGGACTACACCTCGCAGCGAGGATCTTCTCACCACAACGACACCGCTCTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTTGATTTCAACAAGAACCAGCTGGTGGAGAAGATCCGAAGGTTGAAGAAGAAGTACCGAAACGTCCTCAACAAGATTGGCTCCGGCAAGGAATTCTCCTTCAAGAGCGCGCACGATCAAGCTACCTTCGAAATCTCGCGCAAGATCTGGAGCAGCGTGGCTCCAATCGGCGACAATTCCTTGGACGACGACGAAATCAACCCTTGCCCCAATCCTAACCCTAGCCCCCACCCTAACCTTAATTTTAGCCCTGTAATTCATAAGAACGAAATGATTTTCAGGAATACGGTGGAGAAGAAAACGCCAAAACGCTCCCGGCCTCGATCGGCGGTGAAAGTGGAGTCAAACGATGGATCGGCGTCGATCAAAGATCACAATTGTACTAGCAATGCTACAACTACGGTTACTCCTAGTGCTACCGCTACTAACACTACTACTGCCGCTGCTGCTACTACTAATAACAATTGTAACAGTGGTTATAGCAATAACATACCGAGTTTGATCGAGGAGACGGTGAGGAGTTGTTTGTCGCCGGTGTTGAGGGAGTTGATGGGAGCGATGGGAGGGGGAGCGTTTGGGGGGAGAGGGTTTTCGTTGAATTTAAACCCTATGCCTTTGATGAATTTGAGTTATGGTGGTGGAGAATTGGTGGATGAGAAATGGAGGAAGCAACAGATATTGGAGTTGGAGGTGTACTCGAAGCGGTTGGAGCTGGTGCAGGATCAGATCAAGGCTGCGATGGAGGAGTTGCGGTCCGGCGGAGGAGAACATATTGAAATAATTGGTGCGGAGTGA 1245 0.5333 MASQQHDAVFREEDMDDDDDDSQEDEEFEEDDDVLAADDEENEPSSSAALAVTVAVPGSAISNGGAAPLSTPTPTTIVIADSSDPKRRRVEAVEEKKPPLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSSVAPIGDNSLDDDEINPCPNPNPSPHPNLNFSPVIHKNEMIFRNTVEKKTPKRSRPRSAVKVESNDGSASIKDHNCTSNATTTVTPSATATNTTTAAAATTNNNCNSGYSNNIPSLIEETVRSCLSPVLRELMGAMGGGAFGGRGFSLNLNPMPLMNLSYGGGELVDEKWRKQQILELEVYSKRLELVQDQIKAAMEELRSGGGEHIEIIGAE* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02076 414 MobiDBLite consensus disorder prediction 12 40 - -
Lapu6g02076 414 MobiDBLite consensus disorder prediction 247 286 - -
Lapu6g02076 414 Coils Coil 155 175 - -
Lapu6g02076 414 Coils Coil 379 399 - -
Lapu6g02076 414 Pfam Protein of unknown function, DUF573 107 201 IPR007592 GO:0006355
Lapu6g02076 414 MobiDBLite consensus disorder prediction 1 48 - -
Lapu6g02076 414 MobiDBLite consensus disorder prediction 262 286 - -
Lapu6g02076 414 MobiDBLite consensus disorder prediction 247 261 - -
Lapu6g02076 414 PANTHER BNAANNG10740D PROTEIN-RELATED 5 399 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02076 Lapu-Chr6 20459981 20461777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02076 1 402 GeBP Transcription Factor Family AT5G28040 43.778 1.08e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lapu6g02076 DUF573 1.7e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02076 - - gmx:100779712 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02076 6 20459981 20461777 Lapu7g01384 7 29309105 29310193 PCT