Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02073 ATGAATGAACTTCAAACAGATTCCTCTGCCTCTTCCGAGTTCGTCGAAGTTGATCCAACTGGCAGATACGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAAGTCAAATTGTATGATTTTCTGCAGAGCCCTGAAGATCTCGAGCGGCTTTACTGTGAAATTCATCTTCTCAAGACGCTGAAGCACAGAAACATAATGAAGTTTTACACGTCTTGGGTCGATACTGCAAATAGGAATATCAACTTTGTGACTGAAATGTTCACTTCTGGAACCCTTAGGCAGTATAGACAAAAGCACAAAAGAGTTAACATTAGAGCAGTGAAGCATTGGTGTAGGCAGATCCTGAGAGGGCTTCACTATCTTCATAGCCATGATCCACCTGTGATCCATAGAGATCTAAAATGTGATAATATTTTTGTCAATGGAAACCAAGGGGAAGTTAAGATTGGGGATCTTGGGTTGGCAGCAATTCTCCGCAAGTCTCATGCTGCTCATTGTGTAGGAACGCCTGAGTTCATGGCACCAGAAGTTTATGAGGAGTCCTATAACGAATTAGTTGACATATATTCCTTTGGAATGTGTGTGTTAGAAATGGTCACATTTGAATATCCTTATAGTGAATGTAGTCATCCAGCGCAAATCTACAAGAAAGTTATTTCTGGGAAGAAACCGGAAGCCTTGTATAAAGTGAAGGATCCAGAAGTGCGACAATTTGTTGAGAAATGCGTGGCAACAGTGTCTCTAAGGCTCTCTGCAAGGGAGCTTCTAGATGATCCTTTTCTTCAGATTGATGATTACGAGTATGATTTGGGGCCTGTGGAGAGTGGAGCATTTGATGCCATGGGCCCTCATCAGCCATTTTTTAATCTTCACCGGAGCTATAGTAACATGAGTACTGAATACTCAAATTGCTTTGAATATGAAGGAGACTGGAATTCTCATCCAGCTGAGATTGAACCTAGTGGAATTCAACTTTTCAAGTGCAATGATGATGAAGCCTCCGAAGATGTTGACATAAGCATCAAAGGAAAGAGGAGAGATGATGGTGGAATTTTTTTGAGACTAAGAATTGCAGACAAAGAAGGACATATTCGAAATATCTATTTCCCATTTGACATAGAGATGGACACAGCATTGACTGTAGCAACTGAAATGGTTGCAGAACTCGACATTACTGATCAGGATGTTACCAGTATAGCTGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAAGCCAGGACCAGGAATTGAAGAAACTAACCATATTGCAAATAATTTCTTCTGTCACAATTGTGTGTCTAATCATACTTCCGGTGGCAATATTATGGATTTTCGTTCACATAATCAAGCTGGAAAGAACTCGCAGCTTCCTCAATGCTGTAGGCATGGATGTACATCGATGCATGGGCGGTTCGAGGAGATAACCTTCCCATCTGAGTATGACAATCATGTTAGAGGGGACACACCTATTGAATCAAACCAACCAGACTGCCAGCAGTATCAGGAGCTGTGGACTCATCAAGAAAGTTGTGATCTGAGTTCAGTAGAGTCGGATCAAAGCCATTCTGATGAGCAATATGAACAATTAGATAAATCAGTATTAGCAGAAGACAAAGGAAAGGGTATGTTGGAAAACAAGTTTGCACATGATCCAGGAAATGCCCACTAA 1740 0.4121 MNELQTDSSASSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCRQILRGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVISGKKPEALYKVKDPEVRQFVEKCVATVSLRLSARELLDDPFLQIDDYEYDLGPVESGAFDAMGPHQPFFNLHRSYSNMSTEYSNCFEYEGDWNSHPAEIEPSGIQLFKCNDDEASEDVDISIKGKRRDDGGIFLRLRIADKEGHIRNIYFPFDIEMDTALTVATEMVAELDITDQDVTSIADMIDGEIASLVPEWKPGPGIEETNHIANNFFCHNCVSNHTSGGNIMDFRSHNQAGKNSQLPQCCRHGCTSMHGRFEEITFPSEYDNHVRGDTPIESNQPDCQQYQELWTHQESCDLSSVESDQSHSDEQYEQLDKSVLAEDKGKGMLENKFAHDPGNAH* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02073 579 Gene3D - 369 435 - -
Lapu6g02073 579 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02073 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lapu6g02073 579 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Lapu6g02073 579 MobiDBLite consensus disorder prediction 541 569 - -
Lapu6g02073 579 CDD STKc_WNK 22 281 - -
Lapu6g02073 579 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Lapu6g02073 579 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02073 579 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Lapu6g02073 579 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Lapu6g02073 579 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02073 579 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 545 - -
Lapu6g02073 579 MobiDBLite consensus disorder prediction 535 579 - -
Lapu6g02073 579 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 372 426 IPR024678 GO:0004674|GO:0005524
Lapu6g02073 579 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02073 Lapu-Chr6 20435013 20438916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02073 1 498 MAP Kinase Kinase Kinase AT3G22420 56.387 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu6g02073 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02073 K08867 - gmx:100790554 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02073 6 20435013 20438916 Lapu6g02073 6 20435013 20438916 ECH
Lapu6g02073 6 20435013 20438916 Lapu8g01846 8 35723600 35728635 PCT