Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02066 ATGGGAAAAGCCAGCAAGTGGATCAGAAACTTCCTTCTAGGGAAAAAAGACGAGAAAATCAAGAAGATCGATGCATTCTGCTCCGAGGATATTAAGAGTTCCAACACGGGGAGTCTGATTGTGAGTCCCAAAGTGAAGCGTAGATGGAGCTTCGGAAAACTAACAGGGGGAAGAATAACGAGCAAGATAGTAGGGCATAAATTATCCAGGTCTTTTGACTCAGGTGAGTCTGCGAAACTGCAAATACAAGCCTTGTTGGAAAACAAGACTTCAAGGCGTCTTCCAACACCACTGGCAAGGACTTACAAAGACAAAAACAAAGCTGCTACAAAGATTCAGGCTGGCTTTCGCTCATATTTGGCAAGGAGAGCATTGCATGCTTTAAGGGGATTGGTCAAGTTACAAGCGCTAGTGAGGGGTCACCTTGTGAGGAAACAAACAACTGCTACCCTGCGTGGCATGCATGCGCTGATGGCCATACAAGTTAGAGCGCGAATTCACAGAATTCAAATGGCAGAGGAAGTAAACCTCCTTGGAAAACAGCCTCCACAACATCGAGAAGTTCCTCACTTCAGAGATCTCATGACAGAAGAAAATAAAGATTCAAAGGATATGAGTGTGGAAGAAATGTTGGAGGTTTTGAAAAGCAGAAGTGGTCCTCTAGATGGTTCATATGTTAAGGCCAGAGAACGTGATTCCATGACGTTCTATTCGAAGCATCTGCCGGTTGTTTCCAACCGAAAAAATCATTACAAGAATACTCAAATCGTAGAACCAAACAGCCCCGAAAACTTCCGGGCCATGTCTGAATTTAACACAACGGCAATGGCCTTGTCAACTTCTCAGCGTCACTCAGTGCCTCATCGCCAATCTCTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCTAAAGCTAGGTCGCAGAGTGAACCAAAACAACGACCCAAACGGGGAATGAGGCACAAAGGCAAGTCTGTGGAATCCCCATTGAATGGTCCAAGACAAAATCTGTTCTCAAACTCATTACGTTTTGATCATGGAAGCCTGAACCATTGGGCTGTCAATCTTCATGGGTCAATGGACAGCAAGCGCGATTCCTTTGGTAGCAGCTCAATCACTACTGATTCCTATTATTGA 1143 0.4462 MGKASKWIRNFLLGKKDEKIKKIDAFCSEDIKSSNTGSLIVSPKVKRRWSFGKLTGGRITSKIVGHKLSRSFDSGESAKLQIQALLENKTSRRLPTPLARTYKDKNKAATKIQAGFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRARIHRIQMAEEVNLLGKQPPQHREVPHFRDLMTEENKDSKDMSVEEMLEVLKSRSGPLDGSYVKARERDSMTFYSKHLPVVSNRKNHYKNTQIVEPNSPENFRAMSEFNTTAMALSTSQRHSVPHRQSLSPNYMNKTESSRAKARSQSEPKQRPKRGMRHKGKSVESPLNGPRQNLFSNSLRFDHGSLNHWAVNLHGSMDSKRDSFGSSSITTDSYY* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02066 380 MobiDBLite consensus disorder prediction 361 380 - -
Lapu6g02066 380 Pfam Protein of unknown function (DUF4005) 275 324 IPR025064 -
Lapu6g02066 380 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Lapu6g02066 380 SMART iq_5 104 126 IPR000048 GO:0005515
Lapu6g02066 380 SMART iq_5 127 148 IPR000048 GO:0005515
Lapu6g02066 380 MobiDBLite consensus disorder prediction 277 304 - -
Lapu6g02066 380 MobiDBLite consensus disorder prediction 277 341 - -
Lapu6g02066 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 147 IPR027417 -
Lapu6g02066 380 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Lapu6g02066 380 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Lapu6g02066 380 PANTHER IQ-DOMAIN 5-RELATED 1 333 - -
Lapu6g02066 380 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Lapu6g02066 380 MobiDBLite consensus disorder prediction 364 380 - -
Lapu6g02066 380 Gene3D - 105 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02066 Lapu-Chr6 20358986 20360454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02066 1 317 IQD Protein Family AT4G14750 35.494 2.28e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02066 - - var:108318790 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02066 6 20358986 20360454 Lapu6g02066 6 20358986 20360454 ECH