Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02062 ATGGCCTCATCATCATCATCACCACCACCACCACCGTCTCCTTCTCTAACGTTTACTGTGCAAAGGTGCCAACCTCAGCTTGTGCCTCCTGCTGTTCCCACTCCTCTCGAAATTAAGCTACTTTCCGACATTGATGATCAAGATGGCCTCCGTATCCGCATTCCAATTATACAAATTTATCGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTGAAGTGATCCGGCGAGCACTGTCACAAGCACTTGTGTTCTATTACCCATTAGCAGGTAGGCTGAGGGAGGGGCCTCACCGGAAATTGATGGTGGAGTGCACTGGAGAGGGTGTGATGTTCATAGAAGCTGATGCTGACGTCACACTTGATCAATTTGGTGATTCTCTCCACCCTCCATTCCCATGCTTCCATGAACTGCTATACGATGTTCCTGGCTCCCACCAGATTACCAATTTTTTATATGATTTCTTCTTACTTATGGCTCACCATTTTCTCCCGATTCTCTTAATTCTCTCCTGA 516 0.4671 MASSSSSPPPPPSPSLTFTVQRCQPQLVPPAVPTPLEIKLLSDIDDQDGLRIRIPIIQIYRKQASMAEKDPVEVIRRALSQALVFYYPLAGRLREGPHRKLMVECTGEGVMFIEADADVTLDQFGDSLHPPFPCFHELLYDVPGSHQITNFLYDFFLLMAHHFLPILLILS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02062 171 Gene3D - 19 163 IPR023213 -
Lapu6g02062 171 Pfam Transferase family 20 148 - -
Lapu6g02062 171 PANTHER ACYL TRANSFERASE 4 18 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02062 Lapu-Chr6 20336359 20338984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02062 27 126 Monolignol Biosynthesis Gene Families AT5G48930 36.893 6.33e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02062 K19861 - vra:106774835 229.95