Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02039 ATGCATGTCCATGCAAAAGGTCCCTTGCTTTCTCTTGTTTGTGTCTTTGTTTTGTTGAATGGAATTCATGGTGCATGGAATGAGGAGCCAGGGTCTTTGATCTTGGGTTGTGGATTGGATGAAGGGGGTGCCGAAGATGCAGATGGAAGACAATGGAGTTCTGATAAAAAGTTCTTGGGGACAGAAGATGATTCAATCACATCCAAAGCCTCTTACCAAGACCCTTCTCTTACGTCTGAGATTCCATACATGTCCGCACGTGTTTTCACAGCTGAGTCAACGTACAAATTCCCGGTTATACCTGACAAGCGTTATTGGCTCAGGCTCCATTTTTACCCCTCTCTTTATGGCAGTTTCGATCCCTCTGACGCATATTTCTCCGTGACCGCAAATGGGGTTACCCTTCTCACCAATTTCAGCGCCTCAGTCACTTGTGAGGCCCTCTCACTAGCTTATATTGATAGAGAGTATTCTCTTGCTCCTTTGAATTCAGATACCTTGACTCTCACTTTCAAGCCTTCTGATAAATACAACGGTGCATTCGCTTTTGTTAATGGCATTCAGCTTATCCAAATGCCCGATTTGTTTGATTCTGCAACATTGATAGGGTACGATGACCAAACCATGGATATGACAACCTTGAACATGCAAACCATGTTTAGACTAAACGTTGGGGGGCAGTTCATATCTCCAATCCAAGATTCTGGACTTACAAGGATGTGGTATGATGACACACCTTACCTTTATGGGTCATCCAGTGGTGTGACCAACCAAGCTGAGAAGAATGTCACAATCAACTATCAGACCATGCCAAATTATATTGCTCCTATTGATGTCTACTCCACGTCTAGATCAATGGGGGGAGATAAAAATCTCAACATGGGCTACAATCTCACTTGGAGTTTCCGTGTTGATACCAATTCCATGTACCTTGTAAGGTTACATTTCTGTGACTACTACTACTCCAAAATCAATGAGATTGTCTTCAAAATCTTTGTCAACAACCAAACCGCACAAGATCAAGCCGATGTGATTGGGTGGACAGGAGGCATAGGAGTGCCAACTTATAAGGACTACGTGATATATGTGGAAGATGGAAAGAGTAACGAGTTGCTCTGGCTTGAACTTCACCCTGACCCTGACACAAAGCCTGAGTTCTATGATGCCATACTCAATGGAGTGGAGTTATTCAAGCTCAATGACACAGACTTATCTGCTCCCAATCCTCTGCTTTCAGACATGCTCCTCAAAGAGCACCGGGAGGAGGAAGCTGGTGTCTTCACCCACAAATCTAATCATCATACTGTTATCGGTGGAGCCGCTGGAGGTGCTGCTGGTTTTGCTTTTATGGCTGTAGTATGTGTTGCTGTGTACAACAAGAAGAAGAAAGAACCAGGGTCAGAGGGTCAAACAGGCTGGCTTCCCATCTATTTGAACTCACACTATAGCAAATCCAGCACGTCTGGGAAGAGCATGTGCAGTGCCAACTTATCCGCCATGTCTCAAGGTCTTTGTCGCTATTTCTCCTTGCAAGAGATAAAGCAAGCAACCGAGAATTTTGATGAGTCCAACGTCATTGGGGTTGGTGGATTTGGAAAGGTTTACAAGGGTGTAATTGATAATGGAACGAAGGTGGCAATCAAGAGGTCCAACCCACAGTCAGAACAAGGAGTCAATGAATTCCAAACGGAAATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATCGGTTTCTGCGAGGAAAATGATGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGCACCATGAGGGAGCATCTTTACAAGGGCAACAAACCTATCTCTACTCTATCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACGGGGGCAAAGTACACCATCATTCATAGAGATGTTAAAACAACAAACATTCTCTTGGATGAAAACTGGAGTGCGAAGGTTTCAGATTTTGGCTTGTCAAAAACGGGTCCAGATATGAACACTGGTCATGTTAGCACTGTAGTGAAGGGTAGTTTTGGCTACTTGGATCCTGAATACTTCAGGAGGCAACAGTTGACTGAAAAATCTGATGTTTACTCATTTGGGGTCGTTCTGTTTGAAGCCCTGTGTGCCAGACCTGTTCTCAATCCTAACCTTCCAAAGGAACAGGTTAGTCTTGCTGAATGGGCATTGATTTGCAAGAAAAAAGGAACTATAGAGGATATCATTGACCCTAGTCTCAAGGGAAAAATCAATCCAGAAAGCTTGAACAAGTTCGTAGACACGGCTCAGAAGTGTTTGTCTGATCATGGTGCTACTCGTCCCTCCATGAATGATCTGTTGTGGAATCTTGAATTTGCTCTCAACCTGCAAGAAAATGTTGATGTTGAGGGTGGTTCAACTCATTCTGCTCCTACTGAGAAAAGTGAGTTCGAAAACGACATGGCACGCCACTATAAAAACTTGGGCCTTGGAAATGATGTTGACATTAGCAACGACTCCACAGAGAATCAGAATGAGATCTTCTCACAACTTGTCAGTACACAAGGACGATGA 2580 0.4403 MHVHAKGPLLSLVCVFVLLNGIHGAWNEEPGSLILGCGLDEGGAEDADGRQWSSDKKFLGTEDDSITSKASYQDPSLTSEIPYMSARVFTAESTYKFPVIPDKRYWLRLHFYPSLYGSFDPSDAYFSVTANGVTLLTNFSASVTCEALSLAYIDREYSLAPLNSDTLTLTFKPSDKYNGAFAFVNGIQLIQMPDLFDSATLIGYDDQTMDMTTLNMQTMFRLNVGGQFISPIQDSGLTRMWYDDTPYLYGSSSGVTNQAEKNVTINYQTMPNYIAPIDVYSTSRSMGGDKNLNMGYNLTWSFRVDTNSMYLVRLHFCDYYYSKINEIVFKIFVNNQTAQDQADVIGWTGGIGVPTYKDYVIYVEDGKSNELLWLELHPDPDTKPEFYDAILNGVELFKLNDTDLSAPNPLLSDMLLKEHREEEAGVFTHKSNHHTVIGGAAGGAAGFAFMAVVCVAVYNKKKKEPGSEGQTGWLPIYLNSHYSKSSTSGKSMCSANLSAMSQGLCRYFSLQEIKQATENFDESNVIGVGGFGKVYKGVIDNGTKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMALGTMREHLYKGNKPISTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWSAKVSDFGLSKTGPDMNTGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPNLPKEQVSLAEWALICKKKGTIEDIIDPSLKGKINPESLNKFVDTAQKCLSDHGATRPSMNDLLWNLEFALNLQENVDVEGGSTHSAPTEKSEFENDMARHYKNLGLGNDVDISNDSTENQNEIFSQLVSTQGR* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02039 859 Gene3D Transferase(Phosphotransferase) domain 1 596 811 - -
Lapu6g02039 859 PANTHER OS07G0166700 PROTEIN 504 799 IPR045272 GO:0004714|GO:0006468
Lapu6g02039 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lapu6g02039 859 Gene3D Phosphorylase Kinase; domain 1 480 595 - -
Lapu6g02039 859 Pfam Malectin-like domain 36 398 IPR024788 -
Lapu6g02039 859 FunFam FERONIA receptor-like kinase 32 193 - -
Lapu6g02039 859 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Lapu6g02039 859 FunFam FERONIA receptor-like kinase 214 400 - -
Lapu6g02039 859 SUPERFAMILY Protein kinase-like (PK-like) 496 795 IPR011009 -
Lapu6g02039 859 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02039 859 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02039 859 Gene3D - 214 399 - -
Lapu6g02039 859 Gene3D - 35 193 - -
Lapu6g02039 859 Pfam Protein tyrosine and serine/threonine kinase 524 789 IPR001245 GO:0004672|GO:0006468
Lapu6g02039 859 FunFam Receptor-like protein kinase FERONIA 596 811 - -
Lapu6g02039 859 FunFam receptor-like protein kinase FERONIA 482 595 - -
Lapu6g02039 859 CDD STKc_IRAK 526 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02039 Lapu-Chr6 20191147 20193726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02039 33 806 Receptor kinase-like Gene Family AT3G51550 55.359 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu6g02039 Malectin_like 2.5e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02039 - - gmx:102659961 1419.83