Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02027 ATGGAAGCTCCTGCGGGTGGAGTCGATGATATGACTAAGCTTTCCTATTTGCATGAGCCCGGAGTCCTGCAGAACTTAAAAATTAGATATGAATTGAATGAAATATATACTTACACTGGTAATATACTGATTGCAATAAATCCATTCCAAAGGCTACCTCATATTTATGATTCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTAAGTCCTCATGTATTTGCCGTTGCTGATGTCGCGTATAGGGCAATGATTCACGAAGGAAAAAGCAATTCAATTTTGGTCAGCGGGGAAAGTGGAGCCGGTAAAACTGAAACTACAAAAATGCTTATGAGATATCTTGCCTTCTTAGGTGGTAGGGCTGCCACTGAAGGACGAACCGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGTAGAATATCGGGAGCAGCCATTCGAACATACCTTCTGGAGAGATCTCGGGTTTGCCAGATTAATGATCCTGAACGCAACTACCACTGCTTTTATTTTCTTTGTGCTGCACCACAGGAGGAAATTGAAAAATACAAATTAGGAAATCCTAAAACGTTTCATTACCTTAACCAGTCAAAATGCTATGACCTGGCTGATATAAGTGATTCTCATGAGTATCTTGCTACCAGGAGAGCTATGGATATTGTCGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATATTGGCAATATTGATTTTGCAAAAGGCAAGGAAATGGATTCATCAGTTCCAAAAGATGATAAAGCCAAATTCCACTTAAAAACAACTGCTGAGCTTCTTATGTGCGATGCTGGTTCCTTGGAAGATGCATTATGTAAGCGAGTCATGATCACCCCTGAGGAAGTTATAAAACGAAGCCTTGATCCCCAAAGTGCAGCAGTCAGCAGAGATGGCTTGGCAAAAACAATTTATTCTAGGCTCTTTGATTGGTTGGTGAACAAGATTAATAATTCAATTGGACAAGACTCCAGTTCTAAATCTTTGATTGGGGTGCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGGCAACATCTCAGACCATGATAAGCACTCATGTCTTTAAGATGGAGCAAGAAGAATACACGAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATAATTGCACTCCTTGATGAAGCTTGTATGTTTCCAAAGTCCACACATGAAACATTTTCGAACAAACTTTATCAAACATTTAAGAATCACAAGCGCTTTATTAAACCAAAATTGTCTCGAACAGATTTCACCATTTCTCATTATGCTGGCGAGGTGACCTACCAGTCTGATCAGTTTTTAGACAAAAACAAAGATTATGTGGTTGCTGAACATCAAGATCTATTGAATGCTTCTAAATGTCCATTTGTAGCAGGCCTTTTTCCTCCACTTCCGGAGGAGACATCCAAATCTTCTAAATTTTCTTCAATTGGTGCTCGATTTAAGCTGCAACTACAGCAATTAATGGAAACACTAAGCTCTACAGATCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATTCCAATATTATGCAGCAACTTCGCTGTGGTGTGAGTATAGGTGTTTTAGAGGCGATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCTTTCTTTGAATTTATAAACCGATTTTCCCTTCTTGCTCCAGAGATCACAGAAGCACATCATGATGAAAAGACTGTTTGCCAAAAGATTCTGGAAAAAGCGGGGCTTAAAGGATATCAGATTGGACAAACAAAGGTGTTCCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAAAGCTTGGTAATGCGGCAAAAACTATTCAACAGCGTATACGAACTCATCAAGCTCGTAAACATTATCTTGCACTACGAAAGAAGACTACAATTGTGCAATCTCTTTGGAGAGGAAGACTTGCATTCAAATTTTATAAAAACTTGAGAAGGGATGCATCTGCCGTGAAAATTCAAAAGAATATACGCAGATATCAATCAAGGAAAACCTATACTAATCTCAAAGTATCAGTACTTACTGTTCAAACAGCTTTAAGGGTATTTGCTTCCCTCAAGGAGTTCCGAATTAGGAAACAGGCTAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCTTCATATTATAAGAAGCTCAAGAAAGGTTCAGTTGTCACACAATGCCGATGGAGGGGGATCAAGGGCAGGAGAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACAGGTGCACTTAAAGAGGCAAAGGACAAGCTTGAAAAAAGAGTGGAGGAACTCACTTGGCGTCTTCAACTAGAGAAAAGTTTGAGGAGCAACCAAGAAGAATCCAAGGCACAAGAGATAGCAAAACTGCAGAATTTACTGCAGGAGATGCAGAACAAAGCTGATGAAACCAATGCATTGCTTATTAAGGAGCGAGAGATTGCAAAGAAAGCTATTGAAGAAGCACCTCCCGTTGTTAAAGAAACTGAGGTTATTGTTGAAGACACTCAGAAGATTGAATCACTAACAGTGGAAATTGAGAGTCTAAAGACCTCCCTTGAGTCAGAGAAACAGAAAGCTGACGACTTCGAAACGAAATATAATGAGTCCCAAGCTTATTGTGAAGAAAAGAGTAAACTATTAGAAGAGACAGAGAAGAAGGTTCGTCAGCTCCAAGAATCTTTGACCAGGCTAGAAGAGAAGATTACTAATTCAGAATCAGAGAATCAAGTACTACGTCAACAAGCTGTATCGATGGCACCGAATAAGTTCCTCTCAGGACGCTCTAGATCAGCTATTCAGCGACCGGATGGTGGACATATTGGAACTGAAGCAAAGTCAACTTTGGATATGCATAGCACATCAATTAACCACAGGGAAACGTCTGAAGTGGATGATAAACCACAGAAGTCACTCAATGAGAAACAACAGGAGAACCAAGAATTACTCATTAGATGCATTGCACAAAACCTAGGGTTTGCTGGGAATAGACCAATTGCTGCTTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGACCGTACTAGCATTTTTGATCGTCTAATCCAGACTATTGGTCACGCAGTTGAGACCCAGGATAATAATGATGTCCTGGCTTATTGGTTATGCAATTCCTCTACACTTGTCTTGTTACTACAGCGCACACTGAAGGCAAGTGGTGCGGCTGGAATGGCTCCTCAACGTCGTCGATCTTCATCTGGGAGTCTGTTTGGGAGGGTGACACATAGTTTCCGTGGAACTCCAGCAGGAGTCACCCTTCCCCTTGTCAATGGTAGCATGAGCGGTGTAGATACATTAAAAGTTGAAGCCAAGTACCCTGCTCTCCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCCTGCTTGGATTATGCATCCAGGCACCCAGAACATCCAGAGCGAGCTTGGTTAAGGGATCATCACGTTCAGTTGCAAACACTGAAGCCCAGAAAGCTTTGATTGCGCACTGGCAGGGGATAGTGAAGAGCCTTGGGAACTTCTTAAATACTTTGAAAGCAAATCATGTTCCCCCATTTTTGGTTCGTAAGGTTTTCACTCAAATTTTTTCTTTCATCAATGTCCAACTTTTTAACAGTCTTCTTCTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTGAAATCTGGTTTGGGTGAATTGGAGGATTGGTGCTCTGGCGCCACAGATGAGTACTCTGGTTCGGCTTGGGATGAGCTCAGACATATAAGACAGGCTATTGGATTTTTGGTCATACATCAGAAACCAAGGAAAACGCTGAATGAAATAAGTCATGACCTGTGCCCAGTCCTCAGCGTACAGCAGTTGTATCGGATTAGCACCATGTACTGGGATGACAAGTATGGGACACATAGCGTATCCCCTGATGTTATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTATTAGATGATGATTCCAGCATTCCGTTTTCTGTTGATGATTTAGCGAAGTCGAAGGAACTGATCGATCTCTCTGATTTAGAGGTCCCGCCACTATTACGTGAAAACACTGGCTTTAGTTTTCTGTTGCCACGCCCAGACGGACAGATTTCATAG 4464 0.4091 MEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAVADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYFLCAAPQEEIEKYKLGNPKTFHYLNQSKCYDLADISDSHEYLATRRAMDIVGISQKEQEAIFRVVAAILHIGNIDFAKGKEMDSSVPKDDKAKFHLKTTAELLMCDAGSLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVNKINNSIGQDSSSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQATSQTMISTHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFTISHYAGEVTYQSDQFLDKNKDYVVAEHQDLLNASKCPFVAGLFPPLPEETSKSSKFSSIGARFKLQLQQLMETLSSTDPHYIRCVKPNNLLKPAIFENSNIMQQLRCGVSIGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEITEAHHDEKTVCQKILEKAGLKGYQIGQTKVFLRAGQMAELDARRAQKLGNAAKTIQQRIRTHQARKHYLALRKKTTIVQSLWRGRLAFKFYKNLRRDASAVKIQKNIRRYQSRKTYTNLKVSVLTVQTALRVFASLKEFRIRKQAKASIIIQARWRCHKAASYYKKLKKGSVVTQCRWRGIKGRRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKSLRSNQEESKAQEIAKLQNLLQEMQNKADETNALLIKEREIAKKAIEEAPPVVKETEVIVEDTQKIESLTVEIESLKTSLESEKQKADDFETKYNESQAYCEEKSKLLEETEKKVRQLQESLTRLEEKITNSESENQVLRQQAVSMAPNKFLSGRSRSAIQRPDGGHIGTEAKSTLDMHSTSINHRETSEVDDKPQKSLNEKQQENQELLIRCIAQNLGFAGNRPIAACIIYKCLLHWRSFEVDRTSIFDRLIQTIGHAVETQDNNDVLAYWLCNSSTLVLLLQRTLKASGAAGMAPQRRRSSSGSLFGRVTHSFRGTPAGVTLPLVNGSMSGVDTLKVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLGELEDWCSGATDEYSGSAWDELRHIRQAIGFLVIHQKPRKTLNEISHDLCPVLSVQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLAKSKELIDLSDLEVPPLLRENTGFSFLLPRPDGQIS* 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02027 1487 MobiDBLite consensus disorder prediction 1017 1067 - -
Lapu6g02027 1487 PRINTS Myosin heavy chain signature 373 401 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu6g02027 1487 PRINTS Myosin heavy chain signature 36 55 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu6g02027 1487 PRINTS Myosin heavy chain signature 93 118 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu6g02027 1487 PRINTS Myosin heavy chain signature 140 167 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu6g02027 1487 PRINTS Myosin heavy chain signature 435 463 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu6g02027 1487 FunFam Class V myosin 383 532 - -
Lapu6g02027 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 740 IPR027417 -
Lapu6g02027 1487 ProSiteProfiles IQ motif profile. 739 768 IPR000048 GO:0005515
Lapu6g02027 1487 ProSiteProfiles IQ motif profile. 810 839 IPR000048 GO:0005515
Lapu6g02027 1487 ProSiteProfiles Dilute domain profile. 1115 1426 IPR002710 -
Lapu6g02027 1487 Gene3D Kinesin motor domain 9 618 IPR036961 -
Lapu6g02027 1487 SMART DIL_2 1301 1408 IPR002710 -
Lapu6g02027 1487 Coils Coil 931 958 - -
Lapu6g02027 1487 Coils Coil 966 1007 - -
Lapu6g02027 1487 FunFam unconventional myosin-Va 789 837 - -
Lapu6g02027 1487 MobiDBLite consensus disorder prediction 1048 1066 - -
Lapu6g02027 1487 Coils Coil 833 906 - -
Lapu6g02027 1487 SMART MYSc_2a 1 689 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu6g02027 1487 ProSiteProfiles IQ motif profile. 693 719 IPR000048 GO:0005515
Lapu6g02027 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 742 839 IPR027417 -
Lapu6g02027 1487 CDD MYSc_Myo11 20 676 IPR036018 -
Lapu6g02027 1487 Pfam IQ calmodulin-binding motif 789 808 IPR000048 GO:0005515
Lapu6g02027 1487 Pfam IQ calmodulin-binding motif 741 759 IPR000048 GO:0005515
Lapu6g02027 1487 Pfam IQ calmodulin-binding motif 693 711 IPR000048 GO:0005515
Lapu6g02027 1487 PANTHER MYOSIN 7 1414 - -
Lapu6g02027 1487 SMART iq_5 786 808 IPR000048 GO:0005515
Lapu6g02027 1487 SMART iq_5 809 831 IPR000048 GO:0005515
Lapu6g02027 1487 SMART iq_5 690 712 IPR000048 GO:0005515
Lapu6g02027 1487 SMART iq_5 738 760 IPR000048 GO:0005515
Lapu6g02027 1487 SMART iq_5 713 735 IPR000048 GO:0005515
Lapu6g02027 1487 ProSiteProfiles IQ motif profile. 787 814 IPR000048 GO:0005515
Lapu6g02027 1487 ProSiteProfiles Myosin motor domain profile. 6 688 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu6g02027 1487 ProSiteProfiles IQ motif profile. 714 743 IPR000048 GO:0005515
Lapu6g02027 1487 Gene3D - 383 576 - -
Lapu6g02027 1487 FunFam Myosin heavy chain 196 251 - -
Lapu6g02027 1487 Pfam Myosin head (motor domain) 8 676 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu6g02027 1487 Gene3D - 689 740 - -
Lapu6g02027 1487 Gene3D - 789 838 - -
Lapu6g02027 1487 Gene3D - 741 788 - -
Lapu6g02027 1487 Gene3D Myosin VI head, motor domain, U50 subdomain 256 554 - -
Lapu6g02027 1487 Pfam DIL domain 1302 1405 IPR002710 -
Lapu6g02027 1487 Gene3D - 196 254 - -
Lapu6g02027 1487 Gene3D - 623 688 - -
Lapu6g02027 1487 FunFam Myosin 2 256 373 - -
Lapu6g02027 1487 CDD MyosinXI_CBD 1066 1449 IPR037975 GO:0007015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02027 Lapu-Chr6 20034979 20050723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02027 1 1483 Myosins gene family AT1G54560 80.741 0.0 2521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02027 K10357 - gmx:100816792 2541.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02027 6 20034979 20050723 Lapu6g02027 6 20034979 20050723 ECH
Lapu6g02027 6 20034979 20050723 Lapu7g01421 7 29608449 29623938 PCT