Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02018 ATGTCTTCATCTTCTCGTGTTCTTCCCACTCCCCTAGAAAACAAGTATATGAAACCCCCTGATTCTTTTCATCTTTCACCTGCCAGTGATCTGGCTGCGAATTCCGTCTCATCAAATTCAATCAGAAGTGCTGGGAAGATGATCTCATCACCCTCTGAATGTCCTGATGACATCCCTTTTTCCTATGGTTCACAGCAGGATAGGCAACATCAAGATCCCCCCTTTGTTTCTCAGACCTTGGGTGACAATATGTCTTCCGAAATACACTCAACACCATTCATTTCTCAGCCTCAAGAAAGCGAAGATATTACCTGGGGATCAGATCCATTTCAGGACATTCTTGGGTTTCCAGACAATATTTCTGACCAGCATGATCAGGTGGTACACAATGCCTGTTATATAAATGATGATAATGTCAAAAGAACCGATTTTGGGGAGTGGGTTGATCAGTTAATGTCAATTGATGATTCTCTTCACCCGAACTGGAACCAGCTTCTTGGTGATGACAATGTAGCAGAACCAAAGCCCAAGGTTCCTCAGCTGCAGGATATACCATCTGTTGAAGTTCTCGGCAATTCAGCAGCAGCCACACCACAGACTAAGACTAGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTTGTGGAAGCAGTCAATCAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAGGGTGTGTTGAATCTAATGAAAGTTGATGGCCTTACAATCTATCATGTAAAAAGTCACTTGCAGAAGTATAGAACTGCCAGATACAAACCAGAGCCATCAGAAGGAACGTCAGAGAAAAAGACGACTCGAATAGAAGAAATGAAATCTCTAGACTTGAAAACGAGTAAAGGGATCACTGAAGCATTACGATTGCAGATGGAACTCCAGAAGCGACTTCACGAGCAACTTGAGATCCAAAGAAAGTTGCAGATTCAAATTGAAGACCAAGGGAAACGTCTTCAGATGATGTTTGAGAAACAAAGAGAGATGGGTGACAACAAGGTTAATGGCTCCTCCAATGAAGCCGCCACTGTCACCGCCACTGCCACTGCTGCCGCCGTGGATTCTGTGCTTCCTTCTTCTCCTCCAGTAGAAACCTCAAATGAGGAACGTGAGAATGGCATGCATGAAGAGAAGGATGGAAGCACAAAGCAAAAGGCAGGTGAAGAAGTGATGAATGAAGATGAAGTTGCACCAGCTACAAAGCGGGTGAAAAGTTCATAA 1233 0.442 MSSSSRVLPTPLENKYMKPPDSFHLSPASDLAANSVSSNSIRSAGKMISSPSECPDDIPFSYGSQQDRQHQDPPFVSQTLGDNMSSEIHSTPFISQPQESEDITWGSDPFQDILGFPDNISDQHDQVVHNACYINDDNVKRTDFGEWVDQLMSIDDSLHPNWNQLLGDDNVAEPKPKVPQLQDIPSVEVLGNSAAATPQTKTRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVDGLTIYHVKSHLQKYRTARYKPEPSEGTSEKKTTRIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQREMGDNKVNGSSNEAATVTATATAAAVDSVLPSSPPVETSNEERENGMHEEKDGSTKQKAGEEVMNEDEVAPATKRVKSS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02018 410 MobiDBLite consensus disorder prediction 356 410 - -
Lapu6g02018 410 SUPERFAMILY Homeodomain-like 199 255 IPR009057 -
Lapu6g02018 410 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 193 383 IPR044848 GO:0003700
Lapu6g02018 410 NCBIfam myb-like DNA-binding domain, SHAQKYF class 201 255 IPR006447 GO:0003677
Lapu6g02018 410 MobiDBLite consensus disorder prediction 1 105 - -
Lapu6g02018 410 Pfam MYB-CC type transfactor, LHEQLE motif 288 332 IPR025756 -
Lapu6g02018 410 Gene3D - 200 259 - -
Lapu6g02018 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 258 IPR017930 -
Lapu6g02018 410 MobiDBLite consensus disorder prediction 372 410 - -
Lapu6g02018 410 MobiDBLite consensus disorder prediction 62 105 - -
Lapu6g02018 410 Coils Coil 289 309 - -
Lapu6g02018 410 Pfam Myb-like DNA-binding domain 203 254 IPR001005 -
Lapu6g02018 410 MobiDBLite consensus disorder prediction 28 47 - -
Lapu6g02018 410 FunFam Myb family transcription factor 200 258 - -
Lapu6g02018 410 MobiDBLite consensus disorder prediction 356 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02018 Lapu-Chr6 19966430 19970608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02018 87 408 G2-like Transcription Factor Family AT3G04450 45.954 2.98e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu6g02018 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02018 - - gmx:100803267 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02018 6 19966430 19970608 Lapu6g02018 6 19966430 19970608 ECH