Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02012 ATGAAGACTCCTTGTTGTGAGAGAATGGGATTGAAGAAGGGACCTTGGACTGCCGAAGAAGATCAGATATTGGTCTCTCATATTCAACGATATGGCCATGGCAACTGGCGTGCCCTTCCTAAACAAGCTGGTTTGTTAAGGTGTGGCAAGAGTTGTAGGCTTCGTTGGATAAATTACCTGAGGCCAGATATTAAAAGAGGGAAATTCAGCAAGGAAGAAGAAGATACCATCCTAAAGCTGCATGAAATTCTTGGAAATAGGTGGTCTGCTATAGCAACAAACTTACCCGGAAGAACAGACAACGAAATAAAGAATTTTTGGCATACCCATTTGAAGAAGAGGATTGAAAAAAGTGGAGTGCGCATAAATGGCAATGTTTCATCACATATCTTGCAAGAGGTACAAGCACATAGTTCATCAAGTTCAAGTGCTGCTTCTAGTGTCTATATCAATCCACCTATTGTAGGTACTGGATTTTACGGTGCAGTGTCCTCAGATGCTTTTGGAGAAACTGTGGACAATCATGGTTCTTGTCAGCTAAGTGAAGAAATGGAATTTTGGTACAACATATTCATCAAATCAGGGCAAACATCATGA 597 0.4087 MKTPCCERMGLKKGPWTAEEDQILVSHIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEDTILKLHEILGNRWSAIATNLPGRTDNEIKNFWHTHLKKRIEKSGVRINGNVSSHILQEVQAHSSSSSSAASSVYINPPIVGTGFYGAVSSDAFGETVDNHGSCQLSEEMEFWYNIFIKSGQTS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02012 198 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lapu6g02012 198 SUPERFAMILY Homeodomain-like 9 107 IPR009057 -
Lapu6g02012 198 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 129 - -
Lapu6g02012 198 FunFam MYB-related transcription factor 12 65 - -
Lapu6g02012 198 CDD SANT 68 111 IPR001005 -
Lapu6g02012 198 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Lapu6g02012 198 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Lapu6g02012 198 CDD SANT 15 60 IPR001005 -
Lapu6g02012 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Lapu6g02012 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Lapu6g02012 198 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Lapu6g02012 198 Gene3D - 67 140 - -
Lapu6g02012 198 SMART sant 12 62 IPR001005 -
Lapu6g02012 198 SMART sant 65 113 IPR001005 -
Lapu6g02012 198 Gene3D - 12 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02012 Lapu-Chr6 19925167 19926106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02012 2 118 MYB Transcription Factor Family AT2G31180 76.923 1.91e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu6g02012 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02012 K09422 - gmx:102663040 340.502