Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02006 ATGAGTGGCGTGGTGGGCACCCCTTATTACGTGGCGCCTGAAGTTATCATGGGGAGAGAGTACGATGAGAAAGTTGATGTTTGGAGCTGTGGGGTCATTCTTTACGCTATGTTGAGTGGCTTTCCGCCCTTTTATGGAGACTCTGCTGCAGAAATTTTTGAAGCTGTTTTAAGGGCTAATCTTAGATTTCCTACCACAGTTTTTGGGTCTGTCTCTGCTCCTGCTAAAGATCTCCTCAGGAAGATGATTTGTAGGGATCCCTCTAGACGTATATCTGCACACCAAGCTTTGAGTACGTTTATTAATCTTCTCTAA 315 0.4476 MSGVVGTPYYVAPEVIMGREYDEKVDVWSCGVILYAMLSGFPPFYGDSAAEIFEAVLRANLRFPTTVFGSVSAPAKDLLRKMICRDPSRRISAHQALSTFINLL* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02006 104 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 98 - -
Lapu6g02006 104 SMART serkin_6 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02006 104 Pfam Protein kinase domain 3 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02006 104 SUPERFAMILY Protein kinase-like (PK-like) 2 98 IPR011009 -
Lapu6g02006 104 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02006 104 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02006 Lapu-Chr6 19844776 19845200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02006 4 97 EF-hand Containing Proteins AT1G76040 52.128 2.00e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu6g02006 Pkinase 2.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02006 - K08794 gmx:547573 176.792