Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01979 ATGTCCAAGAAAATGAAGAGCATGAATGCATTTTGTTTATCATGCATTATTGTTCCTCTCTCAATCGTGTCTTTGCTATGCCAATGCAATTCAAAGGAGGTTACGTATATAGTTCACATGGACAAGTCTTACATGCCCAAGGTTTTCACCTCCCAACGCCATTGGTATTCATCCACCGTTACTTCTCTGGACTCCGCCACTCGACACGTTAACCGAACCCTTTTGTACTCGTACGAAGACGCACTTCACGGTTTCAGTGTTGCCTTATCACCACATGAGTTAGCCAGTCTAAAAGAAACCCCAGGTTTTATCTCAGCATACAGAGACAGAGCAACCACTCTTGACACCACCAATTCCTACGGCTTCCTCTCTCTCAACATCTCCCACGGCCTCTGGCCAGCTTCCAACTACGGCCAAAACGTTGTCGTTGGCGTCGTGGATTCCGGAATCTGGCCCGAGAGCGACAGCTTCAAAGACGATGGTATGGTAACTCAAACTCCTCCAAAATGGAAGGGAAGGTGTGAGGGTGGTCAAGGCTTTGACCCCTCCCTCTGTAACTCCAAACTCATAGGCGCAAGATACTTCAACAAAGGCGTTCTCGCAGCGCAAGACGGTGACGACGTCACGAAAATTGGCGCCAACTCCGTCAGGGATATCAAGGGACACGGGACCCATACTGCTTCAACGGTCGCGGGAAACTACGTAAGGGGCGCGTCGTATTTCGGTTACGCGAAAGGCACGGCAAGAGGAATTGCACCACAAGCTAAAATTGCCATGTACAAGGTTGCATGGGCCCAAGGTGTGTTCGCCTCGGACATGCTCGCAGGTTTGGACCAAGCCATCGCTGACGGAGTGGACGTGATTTCCATCTCAATGGGCTTCGACATGGTGCCCTTGTACGAGGATCCTGTCGCAATCGCCGCTTTCTCTGCTTTGGAGAAAGGCGTCGTGGTTTCAGCTTCTGCGGGAAACGCAGGTCCGCTACTGGGGTCCATACATAACGGAATTCCGTGGGTTTTAACGGTTGGAGCGAGCAACACAGAGCGTTCTTTTGGCGGCACGTTAATTCTGGGAAACGGGAAGAGGTTTTCCGGGTGGACTCTGTTCCCAGCAAGTTCAACGGTAAATAACATTCCTCTCCTTTACCATGACAAAGCTTCCACCTGTGACTCTTCTACAGTGTTGTCACAAGTGGCACGTGGCTCCATCGTGATATGCGATTCTGTTGTGGATGTTAACCAGCAGATTCAGCACGTGTCATTGTCTGAAGTGTACGGAGCTGTGTTTATATCCACTGATCCTACTTTGTTTGAAATCGGGAAAATGACGTGTCCTGGCCTTGTTATTAGCCCTCAGCATGGGCAAGATGTGATCAAATATGCACGCGACACTCCATTAGCTTCCGCCACTATAAAGTTTCAAGAAACCTACATTGGAACCAAACGGGCCCCCACGGTGGCCACTTACAGTTCCAGAGGCCCGTCTTGGGAGTGTCCGTGGGTATTGAAGCCCGACGTTATGGCTCCCGGGTCGTCGATTTTGGCGGCCTGGGTTCCGGATGTGCCTGCGGCCGAAATTGGCCCAAACGTGGTGTTGAACAATGAATACAATTTGTTGTCCGGGACGTCGATGGCTTGTCCTCATGCTTCCGGGGTGGTGGCTCTGTTGAGGAATGCACACCCTGAGTGGAGTGCTTCGGCTGTTAGGTCTGCGCTGACAACTACGGCCAGCCCACTGGATAACACTGGAAAGCCCATTGAAGAAAATGGAGAGCTCCGTCGACGGGCTTCTCCTCTAGCCATGGGGGCTGGCCTGATTGACCCCAACCGTGCCCTTGACCCAGGTTTGGTTTATGATGCCACCCCCCAGGACTATGTTAACCTGCTCTGTGCTATGAATTTCACCCAGGCCCAAATCTTGACCATTACTAGATCAAAGGCCTATAATTGCTCAAGCTCATCTTATGACCTCAATTATCCCTCTTTCGTGGCTTTTCATGTTGACGAGAGTGTGACACTGGAGAGAAAATTCCGGAGAAGTGTGACCTACGTTGGAGACGGTCCAGCTGCTTACACGGCACGTGTAAGCTCGTCTAATGGCACACAAATCTCAGTTTCTCCGAATAGATTGCTCTTCAAGGCAAAATATGAGAAACAACAATTCAGTTTGACGTTGAAGTCTGAAATGAATAAGGAAAGTGCTGTGGCTTTTGGTGCACTGGAATGGGTTGAGGAAACAGGAAGGCACGTTGTTAGGAGTCCCCTTGTGGTGGTACCTACCAACTTTGCCTTCAACCCCTAA 2301 0.5037 MSKKMKSMNAFCLSCIIVPLSIVSLLCQCNSKEVTYIVHMDKSYMPKVFTSQRHWYSSTVTSLDSATRHVNRTLLYSYEDALHGFSVALSPHELASLKETPGFISAYRDRATTLDTTNSYGFLSLNISHGLWPASNYGQNVVVGVVDSGIWPESDSFKDDGMVTQTPPKWKGRCEGGQGFDPSLCNSKLIGARYFNKGVLAAQDGDDVTKIGANSVRDIKGHGTHTASTVAGNYVRGASYFGYAKGTARGIAPQAKIAMYKVAWAQGVFASDMLAGLDQAIADGVDVISISMGFDMVPLYEDPVAIAAFSALEKGVVVSASAGNAGPLLGSIHNGIPWVLTVGASNTERSFGGTLILGNGKRFSGWTLFPASSTVNNIPLLYHDKASTCDSSTVLSQVARGSIVICDSVVDVNQQIQHVSLSEVYGAVFISTDPTLFEIGKMTCPGLVISPQHGQDVIKYARDTPLASATIKFQETYIGTKRAPTVATYSSRGPSWECPWVLKPDVMAPGSSILAAWVPDVPAAEIGPNVVLNNEYNLLSGTSMACPHASGVVALLRNAHPEWSASAVRSALTTTASPLDNTGKPIEENGELRRRASPLAMGAGLIDPNRALDPGLVYDATPQDYVNLLCAMNFTQAQILTITRSKAYNCSSSSYDLNYPSFVAFHVDESVTLERKFRRSVTYVGDGPAAYTARVSSSNGTQISVSPNRLLFKAKYEKQQFSLTLKSEMNKESAVAFGALEWVEETGRHVVRSPLVVVPTNFAFNP* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01979 766 CDD Peptidases_S8_3 113 577 IPR034197 -
Lapu6g01979 766 ProSiteProfiles Serine proteases, subtilase domain profile. 119 612 - -
Lapu6g01979 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 115 IPR037045 -
Lapu6g01979 766 Gene3D Peptidase S8/S53 domain 140 625 IPR036852 GO:0004252|GO:0006508
Lapu6g01979 766 SUPERFAMILY Subtilisin-like 119 616 IPR036852 GO:0004252|GO:0006508
Lapu6g01979 766 Gene3D - 629 759 - -
Lapu6g01979 766 Pfam Fibronectin type-III domain 656 757 IPR041469 -
Lapu6g01979 766 CDD PA_subtilisin_like 354 471 - -
Lapu6g01979 766 Gene3D - 348 478 - -
Lapu6g01979 766 FunFam Subtilisin-like protease SBT1.9 26 115 - -
Lapu6g01979 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 757 IPR045051 -
Lapu6g01979 766 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Lapu6g01979 766 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Lapu6g01979 766 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Lapu6g01979 766 Pfam Subtilase family 138 580 IPR000209 GO:0006508|GO:0008236
Lapu6g01979 766 Pfam Peptidase inhibitor I9 35 113 IPR010259 -
Lapu6g01979 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Lapu6g01979 766 FunFam Subtilisin-like protease SBT1.5 140 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01979 Lapu-Chr6 19572128 19574428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01979 13 745 Subtilisin-like Serine Gene Family AT5G67090 41.176 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01979 - - ccaj:109796640 1205.66