Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01969 ATGGGAAACAATGAGGAAGAGAAATCCACCAAGACTGAAAAGCCTTCTTCACCTACAATGGATCAGGCCAATCAGACCAACCAGCCCAATATTCATGTATATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCGTACTACAACTCAGCTGTGGCTTCTGGTCACGCTCCTCACCCATACATGTGGGGTCCACCGCAGCCTATGATGCCACCTTATGGGCCTCCATATGCAGCAATTTATTCGCATGGAGGGGTGTATCCTGCAGTTCCTATCGGGCCACATACACACAGTCAGGGGGTTCCGTCTTCACCTGTAGCTGGGACTCCTTTAAGCATAGAGACACCACCCAAATCATCAGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAGGAGTTTGATGGTCTTGCAATGTCAATAGGCAATGGCCATGCTGAAAGTGTAGAGCGTGGAGGTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGATCACCAACCACTGATGGAGAAGGGAAAACTGAGATACAAAGCAGTCCCATTTCCAAAGACGCTGCAGCTTCTAATAAGATCGGGGCAGTCGTCTCTCCTAGTGTTGGAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACAACCGTGTTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAAGCAAATACCTCAGGTGCCCCACAACCTTGTTCAGTATTACCCGCAGAAGCTTGGTTACAGAATGAGCGTGAGCTGAAACGAGAGAGGCGGAAACAATCTAATCGAGAATCTGCTAGAAGGTCTAGACTAAGGAAGCAGGCTGAAACTGAAGAACTGGCTCGAAAAGTTGAATCCTTGAATTCTGAGAATGAGACACTGAAATCAGAAATAAATCGACTGACTGAAAGTTCTGAAAAAATGAGGGTGGAAAATGCAACATTAAGGGAAAAACTTAAAATTGCTCAACTGGGACAAACACAAGAGATAACTTTGAACATAATTGACAGCCAGAGGGCTACACCTGTAAGCACAGAAAACTTACTATCTAGAGTTAATAATTCCAGTTCTAACGATAGAACTGTGGAGGATGAGAATGGTTTTTGTGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1275 0.4541 MGNNEEEKSTKTEKPSSPTMDQANQTNQPNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYPAVPIGPHTHSQGVPSSPVAGTPLSIETPPKSSGNTDQGLMKKLKEFDGLAMSIGNGHAESVERGGENRLSQSVDTEGSSDGSDGNTSGANQTRRKRSREGSPTTDGEGKTEIQSSPISKDAAASNKIGAVVSPSVGGTIVGPVVSSGMTTVLELRNPSSVHSKANTSGAPQPCSVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNSENETLKSEINRLTESSEKMRVENATLREKLKIAQLGQTQEITLNIIDSQRATPVSTENLLSRVNNSSSNDRTVEDENGFCENKPNSGAKLHQLLDTSPRADAVAAG* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01969 424 Pfam G-box binding protein MFMR 1 95 IPR012900 -
Lapu6g01969 424 Coils Coil 299 347 - -
Lapu6g01969 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 390 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lapu6g01969 424 MobiDBLite consensus disorder prediction 1 32 - -
Lapu6g01969 424 MobiDBLite consensus disorder prediction 200 215 - -
Lapu6g01969 424 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Lapu6g01969 424 MobiDBLite consensus disorder prediction 100 132 - -
Lapu6g01969 424 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Lapu6g01969 424 MobiDBLite consensus disorder prediction 15 32 - -
Lapu6g01969 424 MobiDBLite consensus disorder prediction 103 132 - -
Lapu6g01969 424 MobiDBLite consensus disorder prediction 281 307 - -
Lapu6g01969 424 SUPERFAMILY Leucine zipper domain 282 337 IPR046347 GO:0003700|GO:0006355
Lapu6g01969 424 MobiDBLite consensus disorder prediction 382 424 - -
Lapu6g01969 424 Coils Coil 272 292 - -
Lapu6g01969 424 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Lapu6g01969 424 Pfam Disordered region downstream of MFMR 130 258 - -
Lapu6g01969 424 MobiDBLite consensus disorder prediction 152 215 - -
Lapu6g01969 424 Gene3D - 282 337 - -
Lapu6g01969 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Lapu6g01969 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
Lapu6g01969 424 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01969 Lapu-Chr6 19505584 19512355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01969 1 424 bZIP Transcription Factor Family AT2G46270 50.694 1.03e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu6g01969 MFMR_assoc 4.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01969 K09060 - gmx:778133 715.301