Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01908 ATGGGAGGCAGTGGGGAGAAGAGTATGAAGGGTTTTCAGGGGAAGAAGGAAGGGTTCCGAGGAGGAGTGCCGAAAGGGTGTTTGGCCATAAAGGTGGGTCAAGGAGAAGAGCAACAACGGTTCGTGGTGCCAGTGATGTACTTCAATCATCCCCTTTTCATGCAGCTTCTCAAGGAGGCAGAGGAAGAGTACGGGTTCGATCAAAAAGGAACCATAACCATCCCTTGTCACGTCGAGCAGTTTAGGAACGTTCGAGGCATCATCGACAGGGAAAAGTCCCTCCTTCACCACAATCATGTTCGCTGCTTTGGCTTCTGA 318 0.5094 MGGSGEKSMKGFQGKKEGFRGGVPKGCLAIKVGQGEEQQRFVVPVMYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEQFRNVRGIIDREKSLLHHNHVRCFGF* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01908 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 83 IPR003676 GO:0009733
Lapu6g01908 105 Pfam Auxin responsive protein 18 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01908 Lapu-Chr6 18954660 18955620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01908 23 98 Calmodulin-binding Proteins AT5G20810 47.368 3.41e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01908 K14488 - var:108342322 214.157