Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01900 ATGGAAGACTTGTACCATGTTAGTTTCATCACAGTGGATGAAAATTCTAGTTCATCCAATGATATTTTCTGGGGCACTGAGGAACTAAATGAAGTAAACAAGGTAAAATTTTCTGGAGCAGAAGATCATGGAGTTTATGGGGGAGTTGAATCCTTTTACTCTAATTTGGAGTTCTTGCCAGATTGTCCATCGGAAGAAGGATACCTTTTATCCACTAATCAAGAAAAGTATCACCAACAACAGTCATACCATGATTATGGGTATTTGGATGTTCAGTTTGACATGGTCTCTCCACCACTCCAATTTGATGCACAATATCCAACCACTGTTCCATTGTGTGGCACAACAAAGGATAAGCCACACTCAACTACCCCTTTAGCCTCACTTGAGATCTTGAAGAACTACGGCAAGGGCTTCAAGAGGCTATCCGATGAAGGCAAATCCCTGCAGCCTGTAGTTGACTCTGTGGCCAAAAATGAAGTTGTTTTGAGAAACCTCTCAACTGAAGATGTCATGAGGATAGCAGGAACAAGGTTCATCCAATCATCATCTTCAGAGTCAGAACCTTTGCCTTTCTTGGAAACTCACCCTTACGGTTTTTCCTTCTCTGGACTTTCTGACGAGGATAAAGAGGACGTGGCATTAGCTGAGTCCCTCTTGGCTTCTGCTGAGAAAGTAGGTCATCAACAATTTGAACGTGCAAGCAAGTTGCTAGGTCATTGCGAATCATTGTCAAGCAAAACTGGGAGCCCCGTTAAGAGGATTGTTCACTATTTTGCAGAAGCACTTCGCCACAGGATAGATAGAGAAACAGGAAGCAGTTCATCCAAGGATTTGCAGAAGGGTCAGTCATTTGATCCTGAAGAGGCAGCCAAGGAACTAAACCCCACCATTGTTGCGTTTTATGAAGAGCTTCCCTTTTGTCAAATTTCAGTGTTCACTGCAGTTCAAGCTATAATAGAAGATGTAGCTGAAGCAAAGAAGATTCATGTTATTGATCTTGAAATCAGAAAGGGGGGCCAATGGGTTATCCTAATGCAAGCCCTTGAGTCAAGACATCAATGTCCAATCGAGCTTCTAAAGATAACCGCTATTGAAAGTGGAACAACTAAACACATAGTTGAGGACACTGGTAAGAGATTGAAGAATTTTGCTCAAGGTTTGAACATACCATTCTCTTTCAACATTGTTATGGTACCAGACCTATTACATCTCAGAGAAGATCTTTTTGAAATTGATCCTGAGGAAGCAATTGCTGTTTATTCTCAGTACGCACTTAGAACCAAGATTCAACAATCAGACCAGCTTGAAACCATCATGAGAGTCATTAGAACCTTGAGTCCTAATGTGATGGTGGTAGCTGAAATTGAGGCAAACCACAACTCCACATCTTTCGTAAACCGTTTCATTGAGGCTCTTTTCTTCTTCAGTGCATTCTTTGATTGTCTTGAGGTTTGCATGAAGGGGGATGAGAAGAACCGAATGATTATAGAATCACTATACTTCAGTCATGGAATCAGGAACATTGTGGCCACAGAAGGAGCTGAAAGAAAGACTAGGAATGTGAAGATTGATGTTTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGTGGAGAAAGAACTGAGCACTTTGTCTTTATACCAAGCAGATTTGGTGAGTAAAAGATTTCCTTGTGGAAGTTTTTGCACGTTTGATAAGAATGGGCAGTGTCTTCTTGTTGGGTGGAAAGGAACACCGATTAATTCTGTTTCTGTCTGGAAATTCCTTTGA 1770 0.4141 MEDLYHVSFITVDENSSSSNDIFWGTEELNEVNKVKFSGAEDHGVYGGVESFYSNLEFLPDCPSEEGYLLSTNQEKYHQQQSYHDYGYLDVQFDMVSPPLQFDAQYPTTVPLCGTTKDKPHSTTPLASLEILKNYGKGFKRLSDEGKSLQPVVDSVAKNEVVLRNLSTEDVMRIAGTRFIQSSSSESEPLPFLETHPYGFSFSGLSDEDKEDVALAESLLASAEKVGHQQFERASKLLGHCESLSSKTGSPVKRIVHYFAEALRHRIDRETGSSSSKDLQKGQSFDPEEAAKELNPTIVAFYEELPFCQISVFTAVQAIIEDVAEAKKIHVIDLEIRKGGQWVILMQALESRHQCPIELLKITAIESGTTKHIVEDTGKRLKNFAQGLNIPFSFNIVMVPDLLHLREDLFEIDPEEAIAVYSQYALRTKIQQSDQLETIMRVIRTLSPNVMVVAEIEANHNSTSFVNRFIEALFFFSAFFDCLEVCMKGDEKNRMIIESLYFSHGIRNIVATEGAERKTRNVKIDVWRAFFSRFGMVEKELSTLSLYQADLVSKRFPCGSFCTFDKNGQCLLVGWKGTPINSVSVWKFL* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01900 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 185 577 IPR005202 -
Lapu6g01900 589 ProSiteProfiles GRAS family profile. 206 587 IPR005202 -
Lapu6g01900 589 Pfam GRAS domain family 216 587 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01900 Lapu-Chr6 18852635 18854404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01900 205 588 GRAS Transcription Factor Family AT3G03450 30.749 3.63e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu6g01900 GRAS 1.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01900 - - gmx:100818523 905.975