Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01899 ATGGAGAACCAACAGAAAGTGATGGTAGTAGAAAAGGTATGTGAAATCTATGAGAAAATCTCCAAACTAGGAGACCTCAACCCCTCCAGCCATGTCAACAACCTCTTCACCCAACTTGTCACCATTTGCACCACCCCATGTCAAATAGATGTTTCTCAGCTGAACGAACAGGTTAGAGAAACCATAGCAAAGCTGATTAAACTTTGTGGAAAAGCTGAGGGGCTGCTTGAGAGCCACTACTCAACCCTCATAGGATCACATGAGAACCCTTTAAACCACATGAAACTCTTCCCCTACTACTTCAATTACCTCAAACTAAGTCACTTGGAGTTCACCATGCTCACCACACACTGCACCCAAATCCCCTCCCAACTTGCCTTTGTGGGCTCAGGTCCCCTTCCTCTCACCTCAATTATGCTGGCCACCCATTACCTCAGGCAGACATCCTTCCACAACTACGACATGGATCCTTTGGCAAACGCCAAGGCTCATGGCTTAGTCTCTTCGGATCCTGACTTGTCGAAGAGAATGTTCTTCCACACCAATGACATTCTAAAGGTGTCAAATGGTCTCAAGGACTACAACGTGATCTTCTTGGCAGCACTTGTGGGAATGGACCATAAGGAGAAAGCAGAAGTCATCAAGCACCTAGCCAAGTTCATGGCCCCAGGAGCTATTTTGTTGTTGAGGAGTGCACATGATGCTAGAGCCTTCCTCTACCCGGTGGTTGATCCTTCTTCTGATCTGAAAGGTTTTGAAGTTCTCTCCGTTTTTCACCCCACTGATGAGGTTATTAACTCGGTTATTGTGGCACGCAAGCATTTGGTTAATCAAGGGACTTATTCAGCAGTGTTGGCTAGCAAATGCTCTGGAGTTGAAGGGTTTAATCCCTTCAACAATGGGAACGTTATTGAGGAGTTGACAGTTGAGGATCAAGCTTGA 942 0.4607 MENQQKVMVVEKVCEIYEKISKLGDLNPSSHVNNLFTQLVTICTTPCQIDVSQLNEQVRETIAKLIKLCGKAEGLLESHYSTLIGSHENPLNHMKLFPYYFNYLKLSHLEFTMLTTHCTQIPSQLAFVGSGPLPLTSIMLATHYLRQTSFHNYDMDPLANAKAHGLVSSDPDLSKRMFFHTNDILKVSNGLKDYNVIFLAALVGMDHKEKAEVIKHLAKFMAPGAILLLRSAHDARAFLYPVVDPSSDLKGFEVLSVFHPTDEVINSVIVARKHLVNQGTYSAVLASKCSGVEGFNPFNNGNVIEELTVEDQA* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01899 313 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Lapu6g01899 313 Pfam Nicotianamine synthase protein 3 276 IPR004298 GO:0030410|GO:0030418
Lapu6g01899 313 Gene3D Vaccinia Virus protein VP39 7 274 IPR029063 -
Lapu6g01899 313 PANTHER NICOTIANAMINE SYNTHASE 3 3 289 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01899 Lapu-Chr6 18843900 18844841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01899 5 308 Nicotianamine Synthase Gene Family AT5G04950 52.381 4.27e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01899 K05953 - gmx:100814069 541.576