Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01895 ATGAAATATTTGGGATATGTTCCTGCGTTAGCACGGGATGAGGTAAGGGAGCAAGTAGAGAAAGTACGGAAGGCACAGAAAATGTGGGCGAAGACGAGCTTCAAGCAAAGGCGCCAGTTTTTGCGTATACTTTTGAAGTATATAATTAAACATCAAGCACTTATATGCGAAATATCTTCACGTGATACTGGGAAGACAATGGTAGATGCCTCTTTTGGAGAAATAATGACAACGTGTGAGAAGATAAATTGGCTGCTGTCTGAGGGTGAGCAATGCCTAAAGCCTGAGTACCGATCCTCTGGAAGAGCGATGTTTCATAAGAGAGCCAGAGTAGAATTCCATCCCCTTGGTGTTATCGGTGCCATTGTGTCGTGGAACTATCCTTTCCACAATATTTTTAACCCTATGTTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGGTTTCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCAGAATCATCCAATCAGCCCTTGCTGCTATAGGAGCTCCGGAGGACCTTGTTGAGGTTATAACAGGGTTTGCTGAAACAGGACAAGCACTGGTATCTTCTGTTGACAAAGTCATTTTTGTTGGATCACCTGGGATCGGCAAGATGATAATGAACAATGCTGCGGAGACACTTATACCAGTTACACTGGAGCTTGGTGGAAAAGATGCATTCGTCGTTTGTGAAGATGTAGATGTGGATCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGGGCTGAGAGACTTTATGTCCACAGGAACGTTTATGCACCCTTTGTCAGTAAAGTTACCAAAATTGTAAAATCTGTTACAGCTGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTGTGTATGCATGCGCATTCTGAAAAGCTTGAAGGCCTTATAAATGATGCTTTAGACAAAGGAGCTGAAATTATTGCACGAGGAAGTTTTGGACATATAAGTGAAGGTGCAGTTGATCAATATTTCCCCCCTACAGTGATTGTGAATGTGAATCACTCAATGAGATTGATGCAGGAAGAGGCATTTGGACCAATCATGCCAATTATGAAATTTAGCTCCGATGAAGAGGTTGTGAGGCTTGCAAATGATTCAAAATTTGGGCTTGGATGTGCTGTTTTCTCAGGCAGTCAGAGCCGTGCTAGAGAGATAGCTTCCCAGATACATTGTGGGATTGCTGCGATTAATGATTTTGGTGCAACATACATGTGTCAGTCGCTGCCATTCGGGGGTGTGAAACATAGTGGATTTGGACGATTTGGTGGTGCAGAAGGTTTGCGGGCATGCTGCCTTGTAAAAGCTGTTGTCGAAGATAGATGGTGTCCATTCATCAAAACCGTGATACCGAAGCCTCTTCAGTATCCTGTAGCAGAAAACGGATTTGAGTTCCAGGAAGCTCTTGTTGAAGCACTATTCGGGCTCAGCCTATGGGACCGTTTGCAAGCATTGGTTAACGTGTTGAAAATGCTTACTGAGCAGAGCTCTATACGTGGCAGCAGAAAAAAGAAAGATGACTAA 1575 0.4368 MKYLGYVPALARDEVREQVEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASFGEIMTTCEKINWLLSEGEQCLKPEYRSSGRAMFHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGQALVSSVDKVIFVGSPGIGKMIMNNAAETLIPVTLELGGKDAFVVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERLYVHRNVYAPFVSKVTKIVKSVTAGPPLAGKYDMGALCMHAHSEKLEGLINDALDKGAEIIARGSFGHISEGAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVRLANDSKFGLGCAVFSGSQSRAREIASQIHCGIAAINDFGATYMCQSLPFGGVKHSGFGRFGGAEGLRACCLVKAVVEDRWCPFIKTVIPKPLQYPVAENGFEFQEALVEALFGLSLWDRLQALVNVLKMLTEQSSIRGSRKKKDD* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01895 524 PIRSF ALDH 7 490 IPR012394 GO:0006081
Lapu6g01895 524 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 232 427 IPR016163 GO:0016620
Lapu6g01895 524 SUPERFAMILY ALDH-like 3 456 IPR016161 GO:0016491
Lapu6g01895 524 Pfam Aldehyde dehydrogenase family 3 454 IPR015590 GO:0016491
Lapu6g01895 524 CDD ALDH_F15-22 1 458 - -
Lapu6g01895 524 FunFam aldehyde dehydrogenase 22A1 1 247 - -
Lapu6g01895 524 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 224 231 IPR029510 GO:0016491
Lapu6g01895 524 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 452 IPR016162 GO:0016491
Lapu6g01895 524 FunFam Aldehyde dehydrogenase A 228 422 - -
Lapu6g01895 524 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 454 - -
Lapu6g01895 524 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 252 263 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01895 Lapu-Chr6 18810561 18817459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01895 1 522 Aldehyde Dehydrogenase Gene Family AT3G66658 77.969 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01895 - - gmx:100797873 968.763