Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01894 ATGATTTCCATTCCCACTTCCTCACTTGCTTCATTTAGCCAAAGAGAAGGAGTGGTTGACAGTACAAGGGGCAAGGTTCTTATAAGAGAATATAATGAAAATAAAGATGTTAAAATGGTGAGAAAGCTAGAGAGGAACTCTGAGATTGGGACTAAGAAGGTGGTCTCCATTTTTACCAACATGATGGCTGACCCTTTATCTAGGATTAGGTTTTTCCCCCTTCATGTAATGCTGGTAGCTGAGCTTCTTGAGAACAGGGAACTTGTTGGAGTGGTTAGGGGAGTAATTAAGAATGTAGGAACTCTTTCTGGATCACTCTTGAAGATGGGTTACATCCTAGGCCTCAGAGTGTCTCCTACTTACAGGAGAAAGGGGGTTGCACTAAGACTTGTCACTGCAGTTGAAGAATGGATGGTGAGAAATGGAGCTGGGTATGCATTCCTAGCCACTGAAAAGGATAATGATGCTTCTAAAAACCTATTCACAATTAAATGCAATTATGTGAACCTTAGCTCACTTGTCATATTTATCCAACCAATTAGTTCCCTCACAAAGCATATTTCCAGGGATATAAAAATAGAGAAAGTGGATATGGATCTAGCAATTTCGTTATACAGAAGAACCTTGAGAACCAAAGATTTGTATCCACTAGACATGGACGTTATTCTGAAGGAGAAACTCAGCATAGGGACATGGGTAAGTTATTATAAAAGGGAGGGCTGGCTCGACTTGCGAAGCAAGGTAAATAATGAAGAAGATCTCATTAGCAATGAAACTTCAAAATCATGGGTCATTTTTAGCATATGGAACACTTGTGAAGCTTACAAGCTTCAAGTTAGATGGTCTCAACTAGTAAGGTTTCTTCTTACAACCTTAAATCATGCCACAGAGAAAGTTTTCCCTTGTCTCAAAATGTCGGTGAGTAACTCACTTTGTAGATCCTTTGGGTTTCTCTTTCTTTATGGAATCTATGGACAGGGAGAGAACCTAGGAGAGCTCATGGAATCCATGTGGAGATTCGCATCAAGAGTGGGAGAAGGAATGAGGGACTGTAGGGTGGTTATAACTGAGTTAGGGTTTGGTGATCCACTTGTCAACCATGTTCCTCAAACAGATTCCACCTCATGTATCGATGATCTATGGTACACAAAGAAACTTGCAAGCCACGTTGATGAAAACATTGATGAAATGTTGATGAGACAAGTGGGAAATGTGTTTGTTGACCCTAGAGATTTTTAA 1239 0.4011 MISIPTSSLASFSQREGVVDSTRGKVLIREYNENKDVKMVRKLERNSEIGTKKVVSIFTNMMADPLSRIRFFPLHVMLVAELLENRELVGVVRGVIKNVGTLSGSLLKMGYILGLRVSPTYRRKGVALRLVTAVEEWMVRNGAGYAFLATEKDNDASKNLFTIKCNYVNLSSLVIFIQPISSLTKHISRDIKIEKVDMDLAISLYRRTLRTKDLYPLDMDVILKEKLSIGTWVSYYKREGWLDLRSKVNNEEDLISNETSKSWVIFSIWNTCEAYKLQVRWSQLVRFLLTTLNHATEKVFPCLKMSVSNSLCRSFGFLFLYGIYGQGENLGELMESMWRFASRVGEGMRDCRVVITELGFGDPLVNHVPQTDSTSCIDDLWYTKKLASHVDENIDEMLMRQVGNVFVDPRDF* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01894 412 CDD NAT_SF 77 148 - -
Lapu6g01894 412 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 26 228 IPR000182 GO:0016747
Lapu6g01894 412 Pfam Acetyltransferase (GNAT) family 78 166 IPR000182 GO:0016747
Lapu6g01894 412 Gene3D - 28 180 - -
Lapu6g01894 412 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 23 412 - -
Lapu6g01894 412 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 161 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01894 Lapu-Chr6 18796007 18797818 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu6g01894 Acetyltransf_1 2.3e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01894 - - vra:106754018 738.413