Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01884 ATGGCTAACTTTCCTTCACGCTCCTCTTTTCATCTTTCATCATTCATAGTGGCAATTCTCTTTTCTTGCATCTCACATTCTGCCCTCGCCCTTAATGGACAAACAGTCGCTGACTCTCTTATGTTGACACAAAAGTTAGGAATTAATCGCACTATCAAAGTAGATACCAATGGCAATGGGGACTTCAAAACTATCCAAGAAGCCATAGATTCCATTCCTGAGAATAATTCTAACTGGGTAATTGTTCATATTAGGAAAGGAGCATACAGAGAAAAAGTGCACATACCACAGAATAAGCCTTATATATTCATGAGAGGGAATGGGAGAGGAAGAACTGGCATAGTTTGGTCTCAGAGCTCTAAAGACAACGTGGCTTCTGCCACCTTCAGAGTCGAAGCACATGACTTCGTTGCCTTTGGAATTAGCTTCCAGAATGAGGCACCTACGGGGGTTGCTTATACCTCGCAAAACCAATCGGTGGCAGCATATGTGTCAGCAGACAAAGTCTCATTTTATCATTGTTCATTTTACAGTACTCATAACACTCTCTTTGATCAAAAGGGTAGACATTACTATGATAATTGCTACATTCAAGGCTCAATTGATTTCATATTTGGTCGTGCCAGGACAATCTTCCATGAAGCTGAAATATTTGTGGTAGATGATAAAAGGTTAACGATTCAAGGTTCAATCACGGCTCATAAGAGGGCAAATAAAGATGAGCTGAATGGATATATCTTCATCAAAGGCAGGGTTTATGGCATTGGTGCGGTTTACCTAGGAAGGGCGAAGGGTCCTTATTCTAGGGTGATATTTTCTGAGACATATCTGTCCAAGACCATTGTCCCAGAGGGGTGGACCAATTGGAGCCATGACGGTAGCACAGAAAATCTAGTCCATGCGGAGTACAATTGCCATGGACCTGGAGCTGAGACAAAGGGACGTGCTCCTTGGGCGCTGCAGCTAACTAAGGAAGAAGTCGAACCCTTTCTATCTATTGATTATATTGACGGCAAGAATTGGTTGCCAGTATGGGTGTAA 1041 0.4246 MANFPSRSSFHLSSFIVAILFSCISHSALALNGQTVADSLMLTQKLGINRTIKVDTNGNGDFKTIQEAIDSIPENNSNWVIVHIRKGAYREKVHIPQNKPYIFMRGNGRGRTGIVWSQSSKDNVASATFRVEAHDFVAFGISFQNEAPTGVAYTSQNQSVAAYVSADKVSFYHCSFYSTHNTLFDQKGRHYYDNCYIQGSIDFIFGRARTIFHEAEIFVVDDKRLTIQGSITAHKRANKDELNGYIFIKGRVYGIGAVYLGRAKGPYSRVIFSETYLSKTIVPEGWTNWSHDGSTENLVHAEYNCHGPGAETKGRAPWALQLTKEEVEPFLSIDYIDGKNWLPVWV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01884 346 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 48 342 - -
Lapu6g01884 346 Gene3D - 46 345 IPR012334 -
Lapu6g01884 346 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lapu6g01884 346 ProSitePatterns Pectinesterase signature 2. 197 206 IPR033131 -
Lapu6g01884 346 FunFam Pectinesterase 47 346 - -
Lapu6g01884 346 SUPERFAMILY Pectin lyase-like 48 344 IPR011050 -
Lapu6g01884 346 Pfam Pectinesterase 52 338 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01884 Lapu-Chr6 18701210 18702737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01884 49 342 Carbohydrate Esterase AT5G47500 38.158 2.64e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01884 - - gmx:100792967 588.186