Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01880 ATGTCCTCCTCGCTCATGCCCAACCCAACCGATCGCTCGCGTGACTCCCACCGCGTAAAGAAGAAGAAGAAATCCCCGGCCAAGACCCACCCCCAACACGACCACTCCCACGCCAGATGGAAAACCCACGCGCAGCAGCACCTATATTCCTCCAAGCTCCACCAGGCCCTCGCGCGTGTCAACATCTCCGCCGACGCGCCCCGCCGTGGCCGGGCAGTCCGCGAGGCCGCCGACAGAGTCCTCGCCGCAGCCGCCCGCGGGAGGACGCGCTGGAGCCGCGCCATCCTCACCAACCGCCTCAAGCTCAAGTTCAGGAAGACACCGCACAAGCGACACAAGCTCGTTGGCCCGCCCCGCCCCAAGAAGCCCCGCTTCACCGTCCTCCGCCTCAAGGGAAAAACCCTTCCCGCGGTTCAGCGCAAAGTTAGATTCCTCGGCCGCTTGGTTCCCGGTTGCAGAAAAGAACCGCTTCCGATCATTCTCGAAGAAGCCATCGATTACATACCCGCGCTTGAGATGCAGGTTCGCGCCATGGCGGATCTCGCTCACTTACTCCTCGGAACCTCTTCCTCCTCCTCCTCCTCCGCTGCCGCCGCATCCACCTTCGCGCCGCCGAGTTGA 621 0.6377 MSSSLMPNPTDRSRDSHRVKKKKKSPAKTHPQHDHSHARWKTHAQQHLYSSKLHQALARVNISADAPRRGRAVREAADRVLAAAARGRTRWSRAILTNRLKLKFRKTPHKRHKLVGPPRPKKPRFTVLRLKGKTLPAVQRKVRFLGRLVPGCRKEPLPIILEEAIDYIPALEMQVRAMADLAHLLLGTSSSSSSSAAAASTFAPPS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01880 206 MobiDBLite consensus disorder prediction 1 45 - -
Lapu6g01880 206 CDD bHLH_AtIBH1_like 127 178 IPR044549 GO:0006355
Lapu6g01880 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 186 IPR036638 GO:0046983
Lapu6g01880 206 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 189 IPR044660 GO:0006355
Lapu6g01880 206 MobiDBLite consensus disorder prediction 16 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01880 Lapu-Chr6 18653297 18654493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01880 37 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.090 2.28e-50 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01880 - - gmx:100792237 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01880 6 18653297 18654493 Lapu6g01880 6 18653297 18654493 ECH