Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01846 ATGTGCAGCTGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGATTTAACTGACATAATCCGAGCCAGTGGTGGAGCATATGGTGGTAGCAGCAGCAGCTGCTGCAGCACAGTCACTTCATCTTCTGAATTACCTACCACATCTCATCCCCATACAATTACTCATACCCTCTCTCGAAATGATCACTGGCACCCACACTTCTCTTCTTCCTCTTCTTCTGATCCCATCACTTTCTCTTCTGTGCTTCAAGACCCCAGAGGAGTCACCAACTTTGGTGATCCGTTCTCCACCATGAGAGATCCCTTCCTTCAGGAGCTTGACATGCCTTCCGCTTCTGCCTACTTCACTGGGGGCTTGGAAGAAGCAGCTGCAAGTTTTGCTGCTGCTGCTGTTAATACCAATGCTAATACTAGTACCACTGTTTTCTCTACACACAAGATTCTTGAGGAACATGACATGAGAAGACCTTGTAAAAACATATTCTCCAACATGATTCAGATCTCTCCCAATGCAAAGTTACCGGTCTCACCCTATGATTCCACCACTACCATGGCACCTTCTCCAAGGGCAATTAAACCTCCTGCTGTTGTTTCACCCAACATGGTTAATGCAAACACCTCCAAGGATTGCCTTGTGGACACCACAGGAGTGCAGATCTCATCTCCACGGAATCCGGGTCTTAAACGAAGGAAGAACCAGGCCAAAAAGGTGGTTTGCATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTTGTTCCGTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCAATTAAAGGTTCACCTTATCCCAGGGGTTACTACAGATGCAGCAGCTCGAAGGGTTGCTCTGCGAGGAAGCAAGTTGAGCGGAGCAGAACAGACCCAAACATGTTGGTTATTACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACCAGGTCACAACCATCCAAGAACAATGCTGGAAATTCAAAGAGCTCAGAAGGCTCAAACCCCCAAAAGAACACAACACCAAAGGCAAAGGATGAGCAGCAGCAGGAGAGCAACAACAGTGAGGGCAATGTGTCCCCAGTCGTGGCTGGGAACTCATCAGCAAACAGTGCATCTGTGAAGGAAGAGAATATGGAAGACATGGAGAAGCAGTTTGAGATGGATGAGGGAGAGTTCAGTGATGGACTCCCTTACAAGCCTTGTTTGATGGATCAGAGTAATAATCAATCCGAGGACTTCTTTGCTGAATTGGGAGAAATAGAGGCTGACCCACTGGACCTTTTGTTTACCCAAGGTTTTGGTGCAGCTGATGATCAAAGGGAGGAATCCAAGGCCTTAGATCCATTCCATCTGTTTGACTGGTCAGGAGACAACAACACCAGCACAAACACCAGCTCATTTGAAGAACCTAATTCAAAGAGAAGGTTATAA 1473 0.4684 MCSCIFGPIIMDNYQGDLTDIIRASGGAYGGSSSSCCSTVTSSSELPTTSHPHTITHTLSRNDHWHPHFSSSSSSDPITFSSVLQDPRGVTNFGDPFSTMRDPFLQELDMPSASAYFTGGLEEAAASFAAAAVNTNANTSTTVFSTHKILEEHDMRRPCKNIFSNMIQISPNAKLPVSPYDSTTTMAPSPRAIKPPAVVSPNMVNANTSKDCLVDTTGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNAGNSKSSEGSNPQKNTTPKAKDEQQQESNNSEGNVSPVVAGNSSANSASVKEENMEDMEKQFEMDEGEFSDGLPYKPCLMDQSNNQSEDFFAELGEIEADPLDLLFTQGFGAADDQREESKALDPFHLFDWSGDNNTSTNTSSFEEPNSKRRL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01846 490 Gene3D WRKY domain 232 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu6g01846 490 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu6g01846 490 MobiDBLite consensus disorder prediction 466 490 - -
Lapu6g01846 490 MobiDBLite consensus disorder prediction 302 388 - -
Lapu6g01846 490 Pfam WRKY DNA -binding domain 260 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu6g01846 490 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu6g01846 490 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 443 IPR044810 GO:0003700
Lapu6g01846 490 MobiDBLite consensus disorder prediction 468 483 - -
Lapu6g01846 490 MobiDBLite consensus disorder prediction 275 418 - -
Lapu6g01846 490 FunFam probable WRKY transcription factor 14 232 312 - -
Lapu6g01846 490 SUPERFAMILY WRKY DNA-binding domain 256 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01846 Lapu-Chr6 18234939 18238910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01846 1 451 WRKY Transcription Factor Family AT2G34830 43.226 1.01e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu6g01846 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01846 - - aprc:113852911 760.755