Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01821 ATGTTGATAACAATGCCTATATATGCTCAGGCATATTCTGCAGAAGAGCAGATTATAGCAAAACCTGGGTGTAATTCCACATGTGGAGGTGTTGACATCTCTTACCCCTTTGGAATGAAATATCCGAGATGCTACGCAGACAAGTGGTTTGAAGTAGAATGCAGAGAAACTTCTGACGGTCAAAAACCCTACCTAAAGTCTTTAAATCTGGAGGTCACATTCGTTGGCTCGAATATGGTTTATGTCATGAATCCAATTTTCCGTTGGAACTGCCCCAGCAAAACACCGAAGCCAGAAGTAGTAAACCTGAGAGGAAGCCCTTTCGTGTATTCGCAGGATTACAACAAATTTGTGTCCATTGGTTGCAACAACCTTGCTTTTTTGCAGTCCGATGGGTCCAATGTCGCTTGTTGTGTGTCCATCTGTGACGACAGTGAAGAAGTCAACGATAACTTCAACTTGGTAATGGCAAGAGAAGACAGTTGTAATGGCAGGTTCTGCTGCGAGACTTCACTGCCCAAGTATCTTTCAGAATATAACGCAACACTTCAAGATTTTAACACCGAAAACAATAATACTGCGAATGAACCGTGTAGCTATGCGTTCATTGCATATGGATACTGGTACCAGCGATATACGTCTGAGTTTAACAATACGGATTATGTTCTTGCAATGCTTGAGTGGGAGATTACGGATAACACGCTTAAGAATTCTACCCTTCAACTCCTTTCACTATCAGATCATGTCACTTGTGATCGCTCTAATGTTACGTCTTCGCAAAACACAACCTCTGGTTGGAGATGCCGCTGCATAGAAGGCTTCTATGGCAATCCCTATGTTGCAGGAGGCTGCACCGCCCTCCCAGGTAACGGTAACGGTCAAGCGAAGAAGTGGGCAATAGTAGGAGTTTCGTCAAGTCTGGGATCTATAGTTTTTCTCTTTGGTCTATGGTTGCTGTATAAAGCTGTAAGGAAGAGAGTGATAGAGAAACGCAAACAGATGTTCTTCAAAAAGAATGGTGGTTTGTTGTTGCAGCAAAGAATGTCATCTAATAATGAAGCTAATGTAGACAAAGCTATTCTCTTTAGCTTAGATGATTTAGAGCAAGCCACTGACAAATTTAGCATGAATAGAGTTATTGGAAAGGGAGGGCAAGGTACAGTTTATAAAGGAATGCTAGTAGATGGTACAATTGTTGCAGTGAAAAAGTTTAAGGTGGAAGGAAATATTGAAGAATTCATCAATGAGTTTGTCATTCTTTCACAAATTAACAACAGAAATGTGGTCAGGTTGTTAGGATGTTGTTTGGAGACAGAAATTCCCCTGCTTGTTTATGAGTTCATTCCTAATGGTAATCTCTTTGAATATTTGCATGACCAAAACAAGGAGTTATTACCAATGACATGGGATATGTGTTTGAGAATTGCCACTGAAATTGCAGGAGCTCTATTTTATTTGCACTCAGTTGCATCTAAACCCATTTATCATAGAGATATCAAATCCACGAATATACTACTGGATGAAAAATATAGGGCAAAAATTGCAGATTTTGGAACATCCCGAGTAATTTCTATTGAAGCTACTCATCTTACAACAGTTGTTCAAGGTACCTTTGGTTATTTGGATCCTGAATATTTTCACACTAGTCAATTTACTGAAAAAAGTGATGTCTATAGTTTTGGAGTAGTGCTTGCTGAACTTTTAACAGGCCAAAAGCCAATATCATCAGTAAGATCTGGAGAGTTCAAGAATTTAGCTTCATATTTTGTTGAATGTCTGGAGGAGGACCATCTGTTTGACATTATTGATAAAAGAGTTGTGAAAGAAGCAGAGAAGGGACAAATCATTGCTGTTGCTAATCTTGCATATAGATGCTTAGAGTTGAATGGAAAGAAGCGTCCAACTATGAAAGAAATCACATTTGAATTAGAAGGGATTCATAGATTGGTTAGGAAGCGTAATGCAGAGAAAAACGGTGACGAAATTGAGCTTGCTCGAATTGAAGATTCCCATCCTTGGGATGGATATTCTACATCAAATTCATGGGACTCAAGGTTATACCCATGGTAG 2070 0.3942 MLITMPIYAQAYSAEEQIIAKPGCNSTCGGVDISYPFGMKYPRCYADKWFEVECRETSDGQKPYLKSLNLEVTFVGSNMVYVMNPIFRWNCPSKTPKPEVVNLRGSPFVYSQDYNKFVSIGCNNLAFLQSDGSNVACCVSICDDSEEVNDNFNLVMAREDSCNGRFCCETSLPKYLSEYNATLQDFNTENNNTANEPCSYAFIAYGYWYQRYTSEFNNTDYVLAMLEWEITDNTLKNSTLQLLSLSDHVTCDRSNVTSSQNTTSGWRCRCIEGFYGNPYVAGGCTALPGNGNGQAKKWAIVGVSSSLGSIVFLFGLWLLYKAVRKRVIEKRKQMFFKKNGGLLLQQRMSSNNEANVDKAILFSLDDLEQATDKFSMNRVIGKGGQGTVYKGMLVDGTIVAVKKFKVEGNIEEFINEFVILSQINNRNVVRLLGCCLETEIPLLVYEFIPNGNLFEYLHDQNKELLPMTWDMCLRIATEIAGALFYLHSVASKPIYHRDIKSTNILLDEKYRAKIADFGTSRVISIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTGQKPISSVRSGEFKNLASYFVECLEEDHLFDIIDKRVVKEAEKGQIIAVANLAYRCLELNGKKRPTMKEITFELEGIHRLVRKRNAEKNGDEIELARIEDSHPWDGYSTSNSWDSRLYPW* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01821 689 Gene3D Transferase(Phosphotransferase) domain 1 448 670 - -
Lapu6g01821 689 CDD STKc_IRAK 380 646 - -
Lapu6g01821 689 Coils Coil 176 196 - -
Lapu6g01821 689 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 651 IPR045274 GO:0007166
Lapu6g01821 689 CDD EGF_Lam 246 285 IPR002049 -
Lapu6g01821 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Lapu6g01821 689 FunFam Wall-associated receptor kinase 2 448 666 - -
Lapu6g01821 689 SUPERFAMILY Protein kinase-like (PK-like) 358 643 IPR011009 -
Lapu6g01821 689 Pfam Protein tyrosine and serine/threonine kinase 375 641 IPR001245 GO:0004672|GO:0006468
Lapu6g01821 689 Gene3D Phosphorylase Kinase; domain 1 340 447 - -
Lapu6g01821 689 Pfam Wall-associated receptor kinase galacturonan-binding 24 68 IPR025287 GO:0030247
Lapu6g01821 689 ProSiteProfiles Protein kinase domain profile. 374 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01821 689 SMART serkin_6 374 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01821 Lapu-Chr6 18037844 18040607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01821 24 646 Receptor kinase-like Gene Family AT1G69730 44.063 1.48e-178 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lapu6g01821 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01821 - - gmx:100798794 1009.59