Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01811 ATGCAAGAGGCCTTGAAGAGTATGCTTTGCCCTTCTTGTGGGGGTCCACCGTGTATTGATGGAGATCGTGAGCACGCTATCCATAATATGAAACTTGAAAATATTCACCTAAAGGAAGAGCATGAGAAGGTGTCTCGTCTTCTTTCGAGGTACTTGGAGAGCCAGATGTTACCACCTGATCAGTTCCAACAGGGTTTTTTTCCCATCATAGGATCAAGTTCAAATGCTGCACCCGGAAATTCACTGAACCAAGTGATTGGTGGAAGTTCAAGTCATGATCCAAATCTTGCTTTGCAAATTATGGATGGTGGCCATAACTTATTTGCTAGTGAAGGCATAGAAAAAAACCTTATGGCTAAGGTTGCTGCTACCGCAATGGATGAGTTAATTAGGCTTCTACGGATTAATGAGCCATTTTGGGTTAAGTCTTCAACTCAAGATGGGAAGCTCAGTCTCCTGCTTGAAAACTACCAAAAAATGTTCCCAAAGACCCGACACTTTAAAGGCCCTAACATGCGGATAGAGGCAACAAAAGAGTCGGGAATAGTGAGAATCAACAGCATTCAGCTTGTTGACATGTTCCTAGACTCTGACAAATGGGTTAATTTGTTGCCGACAATTGTTTCAAAAGCACAAACAATCAAAGTACTTGAAAGGGGCTTGGCAGGAAACCGAAGTGGAGCCTTGCAGTTGATGTTCGAGCAAATGCACGTCCTTTCACCCTTTGTGCAACCTCGTGAATTTCAGTTCCTTCGTTTCTGTCAACAAATTGAAGAAGGCCTGGTGATAGCAGATGTGTCCTATGACTCCTTTCAGCAAAAGCCCTCTATTTTTCACTCTTGGAAACATCCCTCTGGATGCTTGATCCAGGAACTGCCTAATGGTTGCTCCATGGTTACATGGGTTGAGCATGTGGAAGTGGATGATAAAATCCAAACACATCCGCTGTACAAAGATATTATTGTTAAGGGCATTGCATACGGAGCTGAAAGGTGGATTATGGAACTTCAAAGAATTTGCGAGAGATTTGCTGCCTTTTATGCTGAAAAGATACCTGATCATGACGCTGCAGGAGTGATCAATTCTCTTGAAGGAAGGCGAAGTGTAATGAATGTTGCTCATCGCATGCTCAAAAACTTCTGTGAAAGTATAACAATGGCAGATGGCTTGGATTTTCCACTTTCTGATATGGCGAATTGTAGCGGGGTGAGGGTCTCTATTCGCGAAAGCAAAAACGTTGGACAACCAAGTGGCATGATTGTTGCAGCTGCCACCACCATTTGGCTTCCTCTCCATTATATGAAACTTTTTGAGTTCGTAACAGATGATAAAAACCGTGCTCAGTGGGATGTTCTTACCTGTGGAAATCAGGCACACAAGGTTGCGCACATCTCAAATGGAATTCACCCTGGGAACTGTGTATCGATTATTCGGCCATTCATCCCTAGTGAGAACAATGCACTGATTCTTCAAGAGACTTTCACAAGCCCCCTGGGATCGTATGTTATATATGCTCCAACTGATGTAGCAACTATGACTTCGGCCATAATGGGAGAAGACTCTTCAATGTTACCAGTTCTTCCATCAGGTTTTGTCATCTCTGCAGATAGAGAACCACATGCAGCTTTGGGAGGATTTGATGGTTCAGATACTGAAGGATTGGGAGGCTCATTGCTCACTGTGGCATTTCAAATACTAGCTACTGCTGATGGAAGCAATATGCCAAATAGGAAAGCTGGAGCAGCTGTGAACTCCCTTTTAACCTCAACTATTATGAGAATCAAGGATGCTCTGAATTGCAACAATTTGGAGTGA 1815 0.4325 MQEALKSMLCPSCGGPPCIDGDREHAIHNMKLENIHLKEEHEKVSRLLSRYLESQMLPPDQFQQGFFPIIGSSSNAAPGNSLNQVIGGSSSHDPNLALQIMDGGHNLFASEGIEKNLMAKVAATAMDELIRLLRINEPFWVKSSTQDGKLSLLLENYQKMFPKTRHFKGPNMRIEATKESGIVRINSIQLVDMFLDSDKWVNLLPTIVSKAQTIKVLERGLAGNRSGALQLMFEQMHVLSPFVQPREFQFLRFCQQIEEGLVIADVSYDSFQQKPSIFHSWKHPSGCLIQELPNGCSMVTWVEHVEVDDKIQTHPLYKDIIVKGIAYGAERWIMELQRICERFAAFYAEKIPDHDAAGVINSLEGRRSVMNVAHRMLKNFCESITMADGLDFPLSDMANCSGVRVSIRESKNVGQPSGMIVAAATTIWLPLHYMKLFEFVTDDKNRAQWDVLTCGNQAHKVAHISNGIHPGNCVSIIRPFIPSENNALILQETFTSPLGSYVIYAPTDVATMTSAIMGEDSSMLPVLPSGFVISADREPHAALGGFDGSDTEGLGGSLLTVAFQILATADGSNMPNRKAGAAVNSLLTSTIMRIKDALNCNNLE* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01811 604 SUPERFAMILY Bet v1-like 365 598 - -
Lapu6g01811 604 SMART START_1 120 342 IPR002913 GO:0008289
Lapu6g01811 604 Gene3D - 118 328 IPR023393 -
Lapu6g01811 604 SUPERFAMILY Bet v1-like 113 344 - -
Lapu6g01811 604 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 599 IPR042160 -
Lapu6g01811 604 Pfam START domain 121 342 IPR002913 GO:0008289
Lapu6g01811 604 ProSiteProfiles START domain profile. 111 345 IPR002913 GO:0008289
Lapu6g01811 604 CDD START_ArGLABRA2_like 115 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01811 Lapu-Chr6 17924385 17929769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01811 1 599 Homeobox Transcription Factor Family AT1G73360 40.124 1.90e-151 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01811 K09338 - gmx:100795075 893.264