Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01810 ATGGATTTTGCCATGGGCGCTGCAGGTGGATCCGGCGATGATCAACACAATCACCGTCACAATTACAGTCACAATTACAGTCGCAATCAGAGACCAAACAAAGGAAAAAAGGCCTACCATGGTCACAACGCTGATAGAACAGCTAAGCTTGAAGAAATACGCAATGATAACCTCTTACTGAGAGAGGCATTCAAAAATATAATGTGTGCATCTTGTGGAGTTGCATCTAATGTTGATGAAAAGCGTCAACGTTCTCTAGAACAGCTTCGTCTTGAAAATGCTCGTCTTAAAGAAGAGCATGAGAAGGTGTCTAGGGTTCTTGCCAAGTACATAGATCAACCAATGTTAGAACTAAGCATGGACTCCTCCCTCACGAGGGGATCTTCATCACGCTGTCCATTACCAGAAAGTTCTCTGAAACTAGGAACTTTAAGTGGTGCTCATATGAATCTAGGTGGCTCAATAAGTGGTTCATTTGAAAACAAACATACCATGTCCAACCCTCAGAGCAAAATAACACAAATGGAAAGAACAATGATGTCACATATTGCTTTGTCTGCTAAGGAAGAATTACTTAAGCTTTTGTGCACCAATGAGCCCATATGGGTCAAATCTTCAAATGATCACAGATTTATTCTTCATCTTGAAAGCTACGAAACCCTTTTTCCAAGGATTAATCACTTCAAGAATTCCCAAGCCCGTGTAGAATCATCAAAAGATTCAAGGGTTATGACAATTAAGGGAATGGAGTTAGTTGACATGTTTTTGAATTCGATGAGTGAAGAAATACATGTTCTTTCACCTTTAGTTCCATCTAGGGAATTTTGCTTCCTTCGATACTGTCAACAAATTGAAGCACATTCATGGGTGATAGTAGATGTTTCTGTTGATTACAATGAAAACAACAATCCCAAGTATTGGAAGTTTCCCTCTGGATGCATAATTCATGAAGTTTCAAATGAGTTGTGCTGGGTTTCTTGGGTTGAACATGTGGAAGTGGATGAAAAGATTGAACTCCCTCAACTATACAAAAATCTAGTTAATAACAATACTGCATACGGAGCAGAAAGATGGCTTTTGGATCTTCAAAGAACCTGTGCAAGAATTACTAGTATGGGAATTGAATGCATACCTAATTATGACACCAATGGAGTGATCACTGCTCTGGGAGGAAGGAAAAATGTGATGAAGTTTTCTCATCATATGGTGAAAAACTTCTATGGAATTTTAAACATGTCAAGTAAGACAGACTTCCTAGAACATTTAGCTGAGGAGAATACTAATATCAGAATTGCTGCTCGGAAATACACAACATCAAGTCAATCAAATGCCATGATTATATTCGTTGCTACAACTTCTTTTCGGCTTCCACTCCCCTCACAAAATGTTTTTGACTTCTTCAGAGATCCAGTAAAACGTGCTAAGTGGGATGTTATGTGTTATGAGAGTCCAGTTCACGAGGTTGCACGTGTCTATGTTGGAACTCACCCTACCAACTATATATCAATTATTCAGCCTGTCCATGGAACTGCAAATAACATGGCTATTATCCAGGAAAGTTGTATTGATCCACTGGGATCATATGTTGTATATTCCCCAGTGAATATGTCTGACATAAAGATGACTATAAATGGTGAAGATTCAGCAAGAATGTCAATCTTTCCATCAGGCATTGTCATATCAAAGGATGAACAACTTATTAGAAATGCTTGTGCATTGAGTAGTGGAAGTGATGATACAAGAAGATGCAGTACTGTATTAAGTGTGGCTTTCCAAATACTGATGAATGGTCCAGCAACTATGATAGCAGAATCCAAGACTGTTCTCAACTCTCTCATGACCTCAACAATACAAAATATAAACCATGCTTTGATAAATGGTTCTAATTTAGAGGTTCAGTAA 1902 0.3838 MDFAMGAAGGSGDDQHNHRHNYSHNYSRNQRPNKGKKAYHGHNADRTAKLEEIRNDNLLLREAFKNIMCASCGVASNVDEKRQRSLEQLRLENARLKEEHEKVSRVLAKYIDQPMLELSMDSSLTRGSSSRCPLPESSLKLGTLSGAHMNLGGSISGSFENKHTMSNPQSKITQMERTMMSHIALSAKEELLKLLCTNEPIWVKSSNDHRFILHLESYETLFPRINHFKNSQARVESSKDSRVMTIKGMELVDMFLNSMSEEIHVLSPLVPSREFCFLRYCQQIEAHSWVIVDVSVDYNENNNPKYWKFPSGCIIHEVSNELCWVSWVEHVEVDEKIELPQLYKNLVNNNTAYGAERWLLDLQRTCARITSMGIECIPNYDTNGVITALGGRKNVMKFSHHMVKNFYGILNMSSKTDFLEHLAEENTNIRIAARKYTTSSQSNAMIIFVATTSFRLPLPSQNVFDFFRDPVKRAKWDVMCYESPVHEVARVYVGTHPTNYISIIQPVHGTANNMAIIQESCIDPLGSYVVYSPVNMSDIKMTINGEDSARMSIFPSGIVISKDEQLIRNACALSSGSDDTRRCSTVLSVAFQILMNGPATMIAESKTVLNSLMTSTIQNINHALINGSNLEVQ* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01810 633 Gene3D - 239 367 IPR023393 -
Lapu6g01810 633 Pfam START domain 256 368 IPR002913 GO:0008289
Lapu6g01810 633 MobiDBLite consensus disorder prediction 1 43 - -
Lapu6g01810 633 SUPERFAMILY Bet v1-like 392 598 - -
Lapu6g01810 633 MobiDBLite consensus disorder prediction 22 37 - -
Lapu6g01810 633 Coils Coil 79 113 - -
Lapu6g01810 633 ProSiteProfiles START domain profile. 173 371 IPR002913 GO:0008289
Lapu6g01810 633 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 256 624 IPR042160 -
Lapu6g01810 633 SMART START_1 182 368 IPR002913 GO:0008289
Lapu6g01810 633 SUPERFAMILY Bet v1-like 173 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01810 Lapu-Chr6 17890388 17897394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01810 26 624 Homeobox Transcription Factor Family AT1G73360 34.195 7.86e-113 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01810 K09338 - gmx:100794552 739.954