Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01800 ATGAAGCCATTTAGCCTTTTAGTGTTTTCTTTGTATTTCTTGTCCGTGGTGGGGCAGCTTCCTTCTCAGGACATTTTAGCATTGCTGGAGTTTAAGAAAGGCATCAAACATGACCCCAGTGGTTATGTGCTCAATTCCTGGAACGAGGAATCCATTGACTTTGATGGATGCCCATCTTCATGGAATGGAGTTTTGTGCAATGGTGGTAATGTTGCTGGGGTTGTCCTTGATAACTTGGGTCTCTCTGCTGACACAGACTTGAGTGTGTTCTCAAATCTCACTAAGCTTGTGAAACTCTCCATGTGCAACAATTCCATAACAGGAAATCTACATGGCAGCATTGCTGAGTTCAAAAGCCTTGAATTCCTGGATATTTCCAATAATCTCTTTTCCTCATCCTTGCCATTGAGAATTGGTAAGTTAAGTAGTCTGCAGAATCTGTCTCTAGCTGGAAATAATTTCTCTGGCCCAATTCCGGACTCTATTTCAGAAATGGCTTCCATCAAGTCCCTGGATTTGAGCCGCAACTCCTTTTCTGGAGAGCTGCCTGTGTCGTTGACAAAGGTGACTAGCCTTGTATCTCTTAACCTGTCTCATAACAGCTTCACTGGAAAAATTCCCAAAGGTTTTGAGCTGATCTCCGCACTTGAAAAACTTGACTTGCATGGGAATATGCTTGAAGGTAATTTGGATGTTGAATTTATGCTTGTGTCGAGTGCCAGCTATGTTGATTTAAGTGAGAATATGCTGTCTTCTGATTCCAAGCAGAAGTTTCTTCCGCGACTATCCGAAAGTATTAAGCATCTGAATTTAAGCCACAACCAGCTTACTGGATCATTGGCCAGTGGAGTTGCAGAACCTGTTTTTGAAAACTTGAAAGTGTTAGACCTCAGCTATAATCAGTTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTCCAGGTCCTCAGGCTTAGCAACAACAGGTTTTCAGGATTTATTCCTAATGGCCTACTGAAAGGAGACTCTTTGGTTTTAAATGAACTGGATTTGAGTGTCAACAATCTCTCAGGGCCACTAAGTATAATCACATCAACAACGCTTCACTCTCTTAACCTCTCATCAAATGAGTTCACTGGTGAACTGCCCCCGCTGACCGGAAGCTGTGCTATACTTGATCTGTCAAATAACAAGTTAGAAGGAAATTTAACCAGGATGTTGAAATGGGGGAATATAGAATTTCTTGATCTCAGTGGTAATCATTTGATGGGGACCATTCCAGAGGAAACTCCTCAATTTTTGCGACTAAATTATTTGAATTTATCCCATAATTCTCTTAGCAGCTCCCTTCCAAAAGTCTTGACACAGTATCCAAAGCTGAGAGTGCTTGACATTAGTTTCAACCAATTAGATGGACTACTTCTATCTGGACTGCTCACAATGCCGACATTGCAAGAGCTGCATCTTGAAAATAATGTGATCTCTGGTGGCATCAACTTCTCATCTTCTCCGGACCAATCTGATCTTCAGATTCTTGATCTTTCTCACAATCAGCTTAATGGCTATTTTCCTGATGAGTTTGGGTCATTAACTGGCCTTAAAGTGCTAAATATTGCTGGAAATAATTTTTCTGGTTCTCTTCCAACCACCATCGCTGACATGAATTCACTTGACTCCATGGATATATCAAATAATCATTTTACTGGCCCTCTACCAAATAACATGCCAAAGGGGCTCCAAAACTTCAATGCTTCTGAAAATGATCTATCTGGACTTGTTCCAGAAGTTTTTAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATTCCAAGTTACATTTTCCAAATGGTCCTCCCGGATCAAGTGCACCTGCTGAAAGTTCCAAGAGGAAGCATTTGAACACCATTGTTAAAGTAATAATCATAGTGTCATGTGTGATTGCGCTCTTCATATTAATCCTGCTTGCTGTCTTCATACACTATATACGTATATCAAGATCGCCACCAGAATATGATACAAGTAAGGATATCAGCAGGCATCCTCAACCAATTATCTCAGCTCCTGTTCGTACTACTGATAGGGGTGGTGCTTTGATGGTTTCGGCTGAGGACCTTGTGGCCACACGCAAGGAGTCTCCATCAGAGGTAATCAGCTCAGATGAAAAAATGGCAGCTGTAACAGGGTTCTCTCCATCAAAACAAAGCCACTTTTCATGGTCACCAGAATCTGGTGATTCGTTCACTGGTGAAAATCTTGCGAGACTAGACACAAGGTCACCAGATCGCTTGATTGGAGAGCTGCATTTTCTTGATGATTCGATAACATTGACACCTGAGGAGCTCTCAAGGGCCCCAGCTGAAGTTTTAGGAAGAAGTAGTCATGGTACTTCTTACAAGGCCACTCTGGAGAATGGTTTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTAGCAAAACAGAGAAAAGAATTTGTCAAGGAGACCAAAAAATTTGCAAACATCAGACATCCAAATGTTGTGGGATTGAGAGGATATTATTGGGGCCCTACACAGCACGAGAAGCTCATACTTTCAGATTACATCTCACCGGGAAGTCTTGCAAGCTTTCTTTATGATCGACCAGGAAGAAAAGGTCCGCCATTAACTTGGATCCAGAGACTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCCATCCCTCACGGGAATCTCAAAGCCACAAATGTGCTGTTAGACACAACTGATATGAATGCGCGCGTTGCTGATTACTGCCTTCACCGGCTCATGACTCAAGCAGGTACTATTGAACAGATTCTTGATGCTGGGGTCTTAGGTTATCGTGCACCTGAGTTAGCTGCCTCCAAGAAGCCAATGCCCTCCTTCAAGTCAGATGTTTATGCTTTTGGAGTGATACTCTTGGAACTTCTAAGTGGAAGGTGTGCTGGTGATGTGATATCTAGTGAGGAGGGAGGTGTTGATCTAACAGATTGGGTGAGGTTGCGTGTGGCAGAAGGCAGAGGTTCAGAATGTTTTGATGCTACCTTGATGCCAGAAATGAGCAATCCTGTTGTAGAAAAGGGAATGAAGGAGGTCCTGGGAATAGCCATGCGATGCATTCGATCAGTTTCTGAAAGGCCTGGCATCAAAACTATATATGAAGATCTCTCTTCTATATAG 3183 0.4244 MKPFSLLVFSLYFLSVVGQLPSQDILALLEFKKGIKHDPSGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSVFSNLTKLVKLSMCNNSITGNLHGSIAEFKSLEFLDISNNLFSSSLPLRIGKLSSLQNLSLAGNNFSGPIPDSISEMASIKSLDLSRNSFSGELPVSLTKVTSLVSLNLSHNSFTGKIPKGFELISALEKLDLHGNMLEGNLDVEFMLVSSASYVDLSENMLSSDSKQKFLPRLSESIKHLNLSHNQLTGSLASGVAEPVFENLKVLDLSYNQLDGELPGFDFVYDLQVLRLSNNRFSGFIPNGLLKGDSLVLNELDLSVNNLSGPLSIITSTTLHSLNLSSNEFTGELPPLTGSCAILDLSNNKLEGNLTRMLKWGNIEFLDLSGNHLMGTIPEETPQFLRLNYLNLSHNSLSSSLPKVLTQYPKLRVLDISFNQLDGLLLSGLLTMPTLQELHLENNVISGGINFSSSPDQSDLQILDLSHNQLNGYFPDEFGSLTGLKVLNIAGNNFSGSLPTTIADMNSLDSMDISNNHFTGPLPNNMPKGLQNFNASENDLSGLVPEVFRKFPSSSFFPGNSKLHFPNGPPGSSAPAESSKRKHLNTIVKVIIIVSCVIALFILILLAVFIHYIRISRSPPEYDTSKDISRHPQPIISAPVRTTDRGGALMVSAEDLVATRKESPSEVISSDEKMAAVTGFSPSKQSHFSWSPESGDSFTGENLARLDTRSPDRLIGELHFLDDSITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFVKETKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWIQRLKIAVDVARGLNYLHFDRAIPHGNLKATNVLLDTTDMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLSGRCAGDVISSEEGGVDLTDWVRLRVAEGRGSECFDATLMPEMSNPVVEKGMKEVLGIAMRCIRSVSERPGIKTIYEDLSSI* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01800 1060 FunFam Leucine-rich repeat receptor-like protein kinase 763 855 - -
Lapu6g01800 1060 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 354 613 - -
Lapu6g01800 1060 Gene3D Transferase(Phosphotransferase) domain 1 857 1060 - -
Lapu6g01800 1060 SUPERFAMILY L domain-like 40 378 - -
Lapu6g01800 1060 PANTHER OS07G0626500 PROTEIN 9 1060 - -
Lapu6g01800 1060 FunFam Pollen receptor-like kinase 1 856 1060 - -
Lapu6g01800 1060 SUPERFAMILY Protein kinase-like (PK-like) 781 1057 IPR011009 -
Lapu6g01800 1060 ProSiteProfiles Protein kinase domain profile. 778 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01800 1060 Pfam Leucine Rich repeat 291 305 IPR001611 GO:0005515
Lapu6g01800 1060 Pfam Leucine Rich repeat 360 376 IPR001611 GO:0005515
Lapu6g01800 1060 Pfam Leucine Rich repeat 265 278 IPR001611 GO:0005515
Lapu6g01800 1060 Pfam Protein tyrosine and serine/threonine kinase 782 980 IPR001245 GO:0004672|GO:0006468
Lapu6g01800 1060 Gene3D Ribonuclease Inhibitor 190 255 IPR032675 -
Lapu6g01800 1060 Gene3D Ribonuclease Inhibitor 138 189 IPR032675 -
Lapu6g01800 1060 Gene3D Ribonuclease Inhibitor 24 137 IPR032675 -
Lapu6g01800 1060 SMART LRR_typ_2 117 141 IPR003591 -
Lapu6g01800 1060 SMART LRR_typ_2 502 524 IPR003591 -
Lapu6g01800 1060 SMART LRR_typ_2 189 212 IPR003591 -
Lapu6g01800 1060 SMART LRR_typ_2 289 311 IPR003591 -
Lapu6g01800 1060 SMART LRR_typ_2 312 336 IPR003591 -
Lapu6g01800 1060 SMART LRR_typ_2 525 548 IPR003591 -
Lapu6g01800 1060 SMART LRR_typ_2 428 451 IPR003591 -
Lapu6g01800 1060 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Lapu6g01800 1060 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lapu6g01800 1060 SUPERFAMILY L domain-like 288 594 - -
Lapu6g01800 1060 ProSiteProfiles Leucine-rich repeat profile. 291 313 IPR001611 GO:0005515
Lapu6g01800 1060 Gene3D Ribonuclease Inhibitor 256 617 IPR032675 -
Lapu6g01800 1060 Pfam Leucine Rich Repeat 191 211 IPR001611 GO:0005515
Lapu6g01800 1060 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 263 - -
Lapu6g01800 1060 Gene3D Phosphorylase Kinase; domain 1 771 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01800 Lapu-Chr6 17799034 17804584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01800 28 1048 Receptor kinase-like Gene Family AT1G55610 26.581 4.46e-80 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu6g01800 PK_Tyr_Ser-Thr 3.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01800 - - gmx:100793639 1882.07