Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01797 ATGGGGAGTGTCCTTGGGGAGAGACTCTATTTTGTTCTGATTCTTGTGGTAGTGTCTGTGACAGTGAGCACTGTGAATGCTCAAACAAAGTCTATTCTCCTAAATTGTGGTTCAAACTCTTCTGTGAATGTGGATGGTAGAAGATGGGTGGGGGACTTGGCTACTGATAACAATGTCACCCTAAGCACCCCCAGTGTTGTTGCTAACACTTCTACCTTAAGTGGCAGTTCAATCTATGATCCTCTGTATAAAACAGCCAGAATTTTCACTGTTCCTTTGAATTACACTATCAAAGATGTTCAGGGAAACTACTTTGTTAGGTTCCATTTTTGCCCCTTTGTGATTAACGACTTCAATGTGAATGACTCCTCATTTGGTGTTGTGGTCAATGGTCTCAAACTGTTATCAGAGTTTGATGTTCCTGGTAAGATATCCCATAAGAATATGAACTTGCTGAATTCCGGAAGAAATGCTACTTCATTCTTCTTGGTCAAAGAATATATTCTGGCTGTGAATGGGGATATGCTTGTGATTGAGTTTGTTCCAACCAGAAGCTCCTTTGGCTTCATCAATGCCATTGAGATTGTCCCAGTTGTGGGTGAGCTTTTTGCTGGCTCTGTTATTAGAGTTGGTGGAAGTGGTGGAAACTTGAATTTGCCCGGACATGGGATGGAGACCATGTATAGGTTGAATGTTGGTGGTCCTGAGATTCAGTCCAATCAGGATCATGATTTTTGGAGAACATGGGAAGTGGATTCTGGATATATGATCATAGAAAATGCTGGGTCTGGAATTAAGAACAGTTCTAACATTACATATTCTTCCGTAAATGATACCTCGGTGGCTCCTCTCCTTGTGTATGAAACTGCAAGGACAATGTCCAACACTGAAGTCTTGGACAAAAGGTTCAACATGTCATGGAAATTTGAAGTAGATCCTGACTTTGATTATTTGATCCGTTTGCATTTCTGTGAGCTGGTTTATGACAGGGCAAATGAGAGAATATTTAGGATCTACATAAACAATAGGACAGCTGCGGATAATGTTGATGTGTTTGTGCGTGCTGGAGGGATGAATAAAGCATATCACCTGGACTATTTTGATCCTGTGTCATCAAAGATTGACACGGTTTGGGTTCAACTCGGTCCTGACACAGCTGCTGGTGCTGCAGGAACTGATGCTCTCTTGAATGGTCTGGAGGTTTTCAAGCTTAGTCGATATGGAAATCTTGCCTATGTTGAGAGGTTTGACATAGGTGGCAAATCAGGAAGCAAATCAAAAGCAAGAGCTGTTTGGGTGGGAGTTGGAGCAGGTGTAGCTTCTGTAGCTATAGTTGCCCTCATAATTCTTGTATTCTGTTTCTGTAAAAGCAGGAGGAAGGAATCAAGTGATACCAAAAACAACCCTCAGGGTTGGAGACCATTGTTCCTCTATGGAGGGACTGCTGTTAACAACTCTGTAGGTGGCAAGGGATCCGCAGGAACCCAAAAGCCGTACGGATCTGTGGCCTCAGTTAGAGTTGGCAAGAGATTTACATTGGCAGAAATAAATGCTGCAACAAATAACTTTGATGACAGTTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTATAAGGGGGAGATTGAAGACGGTGTTCTGGCTGCAATTAAGCGTGCCAACCCCCAGTCTGAGCAAGGCCTGGCTGAATTTGAGACAGAAATTGAGATGCTGTCCAAACTCAGACACAGGCATCTGGTGTCCTTAATTGGTTTCTGCGAAGAGAAGAATGAAATGATCTTGGTTTATGAATACATGGCCAATGGAACTCTCAGGAGCCACCTATTTGGGAGTGATCTCCCTCCCTTACCTTGGAAGCAGCGCCTGGAAGTGTGCATTGGTGCTGCAAGGGGGCTTCACTACCTTCACACAGGTGCTGATCGCGGAATCATTCACAGGGATGTCAAGACAACCAATATTCTGCTAGATGAGAACTTTGTAGCCAAAATGTCTGATTTTGGATTGTCAAAAGATGGTCCAGCCTTTGAACACACCCATGTTAGCACAGCTGTGAAAGGAAGTTTTGGCTATCTAGATCCTGAGTACTTCAGAAGGCAGCAGTTGACTGAGAAATCAGACGTATACTCCTTTGGAGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTGATAAACCCCACCTTGCCAAAAGATCAGATCAATCTTGCAGAGTGGGCAATGAGATGGCAAAGACAAAGATCACTTGACACAATCATTGACCCTCGTCTTAGAGGAAATTATTGTCCTGAATCATTGGCCAAGTTTGGAGAGATAGCTGAAAAATGTCTTGCTGATGATGGAAAGAGCCGTCCCACCATGGGGGAGGTGTTGTGGCATTTGGAGTATGTCTTGCAACTACATGAAGCTTGGCTCAACATGGACGCCACAGAAACTTCCTTCTCTAGTAGTAGTCATGCTTTGAGAGGTCCAAAAGATGGAGTACTAGAAATGGTACACGAGTCTTCAACTCAAGATGAAGTTGGTTTTGATCACAAACACACTGCTGAATCTGATTGA 2556 0.4339 MGSVLGERLYFVLILVVVSVTVSTVNAQTKSILLNCGSNSSVNVDGRRWVGDLATDNNVTLSTPSVVANTSTLSGSSIYDPLYKTARIFTVPLNYTIKDVQGNYFVRFHFCPFVINDFNVNDSSFGVVVNGLKLLSEFDVPGKISHKNMNLLNSGRNATSFFLVKEYILAVNGDMLVIEFVPTRSSFGFINAIEIVPVVGELFAGSVIRVGGSGGNLNLPGHGMETMYRLNVGGPEIQSNQDHDFWRTWEVDSGYMIIENAGSGIKNSSNITYSSVNDTSVAPLLVYETARTMSNTEVLDKRFNMSWKFEVDPDFDYLIRLHFCELVYDRANERIFRIYINNRTAADNVDVFVRAGGMNKAYHLDYFDPVSSKIDTVWVQLGPDTAAGAAGTDALLNGLEVFKLSRYGNLAYVERFDIGGKSGSKSKARAVWVGVGAGVASVAIVALIILVFCFCKSRRKESSDTKNNPQGWRPLFLYGGTAVNNSVGGKGSAGTQKPYGSVASVRVGKRFTLAEINAATNNFDDSLVIGVGGFGKVYKGEIEDGVLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLPWKQRLEVCIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLDTIIDPRLRGNYCPESLAKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMDATETSFSSSSHALRGPKDGVLEMVHESSTQDEVGFDHKHTAESD* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01797 851 SMART serkin_6 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01797 851 PANTHER OS07G0166700 PROTEIN 509 800 IPR045272 GO:0004714|GO:0006468
Lapu6g01797 851 Gene3D - 223 405 - -
Lapu6g01797 851 Gene3D - 28 198 - -
Lapu6g01797 851 Gene3D Transferase(Phosphotransferase) domain 1 599 816 - -
Lapu6g01797 851 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Lapu6g01797 851 Gene3D Phosphorylase Kinase; domain 1 493 598 - -
Lapu6g01797 851 FunFam Receptor-like protein kinase FERONIA 599 813 - -
Lapu6g01797 851 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01797 851 FunFam receptor-like protein kinase FERONIA 490 598 - -
Lapu6g01797 851 Pfam Malectin-like domain 34 403 IPR024788 -
Lapu6g01797 851 Pfam Protein tyrosine and serine/threonine kinase 528 790 IPR001245 GO:0004672|GO:0006468
Lapu6g01797 851 FunFam Putative receptor-like protein kinase 31 198 - -
Lapu6g01797 851 FunFam Receptor-like protein kinase FERONIA 223 406 - -
Lapu6g01797 851 CDD STKc_IRAK 529 794 - -
Lapu6g01797 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lapu6g01797 851 SUPERFAMILY Protein kinase-like (PK-like) 501 795 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01797 Lapu-Chr6 17770136 17773488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01797 10 850 Receptor kinase-like Gene Family AT1G30570 63.938 0.0 1113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu6g01797 Malectin_like 6.1e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01797 - - gmx:100791403 1519.98